RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 RANBP3LQ86VV4 465 aaPredicted RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 NELFCDQ8IXH7 590 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ADAD2Q8NCV1 583 aaKnown RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 UBA3Q8TBC4 463 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ELMO1Q92556 727 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 NSMAFQ92636 917 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ALG3Q92685 438 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 TFAP2CQ92754 450 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ST6GALNAC6Q969X2 333 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 NEURL3Q96EH8 262 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 GALNT14Q96FL9 552 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 OR2M2Q96R28 347 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ELAC2Q9BQ52 826 aaKnown RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 OSBPL10Q9BXB5 764 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 CHIAQ9BZP6 476 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 TM6SF2Q9BZW4 377 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 NDEL1Q9GZM8 345 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 LACRTQ9GZZ8 138 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 GOLPH3Q9H4A6 298 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 RHOJQ9H4E5 214 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ISYNA1Q9NPH2 558 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 MBD2Q9UBB5 411 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 RIMS3Q9UJD0 308 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF490Q9ULM2 529 aaPredicted RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 DMRT1Q9Y5R6 373 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 ATP23Q9Y6H3 246 aa1.15□□□□□ -2.22
LINC00643-201ENST00000334389 URB1O60287 2271 aaKnown RBP1.15□□□□□ -2.22
LINC00643-201ENST00000334389 FAM47DPA6NHR8 397 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 A6NIZ1 184 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SDR42E2A6NKP2 422 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SYCE1LA8MT33 242 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 A8MX80 341 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PGRMC1O00264 195 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SLC25A17O43808 307 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TRIM13O60858 407 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MYO1DO94832 1006 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 APOC1P02654 83 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SCTP09683 121 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CGB3P0DN86 165 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CGB7P0DN87 165 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 UMPSP11172 480 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF37AP17032 561 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MATN1P21941 496 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 COILP38432 576 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 NAA10P41227 235 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TFPI2P48307 235 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CCT5P48643 541 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PITPNBP48739 271 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RAP1BP61224 184 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RAP1AP62834 184 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PLCXD2Q0VAA5 305 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SLC10A2Q12908 348 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ACAP2Q15057 778 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TOMM34Q15785 309 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 HAGHQ16775 308 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TRMT5Q32P41 509 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SLC36A2Q495M3 483 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 XKR7Q5GH72 579 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SEL1L2Q5TEA6 688 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 HECTD2Q5U5R9 776 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 FAM71E1Q6IPT2 247 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RGS7BPQ6MZT1 257 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MFSD12Q6NUT3 480 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 EMBQ6PCB8 327 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SLC25A47Q6Q0C1 308 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 ATRAIDQ6UW56 229 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 C3P1Q6ZMU1 363 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 Q6ZNX1 250 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 Q6ZR03 302 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MICALCLQ6ZW33 695 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CCDC25Q86WR0 208 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 GPHB5Q86YW7 130 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SLC22A9Q8IVM8 553 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CDK20Q8IZL9 346 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OR4K17Q8NGC6 315 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OR52R1Q8NGF1 315 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OR10Q1Q8NGQ4 319 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OR13D1Q8NGV5 346 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 METTL6Q8TCB7 284 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 AGR3Q8TD06 166 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MZB1Q8WU39 189 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 FRZBQ92765 325 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 CIDECQ96AQ7 238 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OXNAD1Q96HP4 312 aaPredicted RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MCEEQ96PE7 176 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TRNT1Q96Q11 434 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 OR4K3Q96R72 315 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 BCL7BQ9BQE9 202 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 EBPLQ9BY08 206 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SRXN1Q9BYN0 137 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RAB17Q9H0T7 212 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 RBM38Q9H0Z9 239 aaKnown RBP1.15□□□□□ -2.23
LINC00643-201ENST00000334389 MMP28Q9H239 520 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 SH3BGRL3Q9H299 93 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 Q9N2J8 555 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 PFDN4Q9NQP4 134 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM38BQ9NVV0 291 aa1.15□□□□□ -2.23
LINC00643-201ENST00000334389 AIG1Q9NVV5 245 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms