RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 HIST2H2BCQ6DN03 193 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ACBD7Q8N6N7 88 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 SPRYD4Q8WW59 207 aaPredicted RBP14.33□□□□□ -0.12
SHOX-201ENST00000334060 GATAD2BQ8WXI9 593 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ELOVL5Q9NYP7 299 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 CNOT2Q9NZN8 540 aaKnown RBP14.33□□□□□ -0.12
SHOX-201ENST00000334060 ICE1Q9Y2F5 2266 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 FBN2P35556 2912 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 J3QLW9 94 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 FARS2O95363 451 aaKnown RBP14.33□□□□□ -0.12
SHOX-201ENST00000334060 CECR9P0C854 216 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ZNF19P17023 458 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 CCNOP22674 350 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 GUCA1AP43080 201 aaPredicted RBP14.33□□□□□ -0.12
SHOX-201ENST00000334060 ERVS71-1P61550 626 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 PPA1Q15181 289 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 XKRXQ6PP77 449 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ZNF101Q8IZC7 436 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 SPARTQ8N0X7 666 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 C1orf162Q8NEQ5 155 aaPredicted RBP14.33□□□□□ -0.12
SHOX-201ENST00000334060 OR2AJ1Q8NGZ0 328 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 RNF133Q8WVZ7 376 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ELOVL3Q9HB03 270 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 CCNB1IP1Q9NPC3 277 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 SCN3BQ9NY72 215 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 IKZF2Q9UKS7 526 aa14.33□□□□□ -0.12
SHOX-201ENST00000334060 ARPC4-TTLL3A0A0A6YYG9 625 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 CLEC18AA5D8T8 446 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 EFCAB10A6NFE3 127 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 F5H5K5 113 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 M0R1B8 84 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 RGS10O43665 173 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 OR2T7P0C7T2 308 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 PCMT1P22061 227 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 HTR5AP47898 357 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 NANOS3P60323 173 aaKnown RBP14.32□□□□□ -0.12
SHOX-201ENST00000334060 EMX1Q04741 257 aaPredicted RBP14.32□□□□□ -0.12
SHOX-201ENST00000334060 ODF4Q2M2E3 257 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 KLHL22Q53GT1 634 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 TIMM23BQ5SRD1 257 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 CLEC18BQ6UXF7 455 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 CLEC18CQ8NCF0 446 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 OR2T27Q8NH04 317 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 OR8B4Q96RC9 309 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 MED18Q9BUE0 208 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 C1orf198Q9H425 327 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 POFUT1Q9H488 388 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 CRIM1Q9NZV1 1036 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 GNG8Q9UK08 70 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 LSM2Q9Y333 95 aaKnown RBP14.32□□□□□ -0.12
SHOX-201ENST00000334060 TPRKBQ9Y3C4 175 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 TIMM10BQ9Y5J6 103 aa14.32□□□□□ -0.12
SHOX-201ENST00000334060 DOPEY2Q9Y3R5 2298 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 OR6C6A6NF89 314 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 ZNF670-ZNF695F2Z2N8 137 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 NGFP01138 241 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 ZNF182P17025 639 aaPredicted RBP14.31□□□□□ -0.12
SHOX-201ENST00000334060 CRYGSP22914 178 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 WNT5AP41221 380 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 GALEQ14376 348 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 SLC36A2Q495M3 483 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 NRN1LQ496H8 165 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 ELFN2Q5R3F8 820 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 MTFR2Q6P444 385 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 PELI1Q96FA3 418 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 HS3ST6Q96QI5 342 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 CELSR2Q9HCU4 2923 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 SNTNA6NMZ2 147 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 TPD52L2O43399 206 aaKnown RBP14.31□□□□□ -0.12
SHOX-201ENST00000334060 IGKV3-15P01624 115 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 POU4F2Q12837 409 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 CDONQ4KMG0 1287 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 LIPNQ5VXI9 398 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 KLBQ86Z14 1044 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 GJC3Q8NFK1 279 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 OR1F12Q8NHA8 337 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 NEUROG1Q92886 237 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 BOD1Q96IK1 185 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 POM121L2Q96KW2 1035 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 ATF6BQ99941 703 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 AKIP1Q9NQ31 210 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 SLC22A13Q9Y226 551 aa14.31□□□□□ -0.12
SHOX-201ENST00000334060 TACC2O95359 2948 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 C5orf49A4QMS7 147 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 DPRXA6NFQ7 191 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 INMTO95050 263 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 PLAUP00749 431 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 EPXP11678 715 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 MAGEB1P43366 347 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 BLVRAP53004 296 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 DGUOKQ16854 277 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 MSMPQ1L6U9 139 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 SNAI3Q3KNW1 292 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 TMEM255AQ5JRV8 349 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 CADM3Q8N126 398 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 STEAP2Q8NFT2 490 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 SSC4DQ8WTU2 575 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 RORBQ92753 470 aa14.3□□□□□ -0.12
SHOX-201ENST00000334060 CENPEQ02224 2701 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms