RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 A0A0C4DFX4 3053 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 CTSVO60911 334 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 FBXO24O75426 580 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 MED6O75586 246 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 SEMA4FO95754 770 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 FCGR3AP08637 254 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNF10P21506 573 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 PGDP52209 483 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 CYCSP99999 105 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 TFF2Q03403 129 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 OR52W1Q6IF63 320 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 SYT13Q7L8C5 426 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 GVQW1Q8N7I0 195 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 OR5T3Q8NGG3 340 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 LCN9Q8WX39 176 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 TMEM41AQ96HV5 264 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 TSPAN32Q96QS1 320 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 OR8B4Q96RC9 309 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 FN3KRPQ9HA64 309 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 RPS10P5Q9NQ39 176 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 GRHPRQ9UBQ7 328 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 TIMM10BQ9Y5J6 103 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 PRSS38A1L453 326 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 URADA6NGE7 173 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 A6NLC8 198 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 H0Y8X5 98 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 CYR61O00622 381 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 AGPAT2O15120 278 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 PNPP00491 289 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 CSTAP01040 98 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 STARD6P59095 220 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 SLC17A1Q14916 467 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 NFATC4Q14934 902 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 SGCAQ16586 387 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 MEP1BQ16820 701 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 SLC22A6Q4U2R8 563 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 EEF1A1P5Q5VTE0 462 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 OTPQ5XKR4 325 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 BHLHE23Q8NDY6 225 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 OTOSQ8NHW6 89 aa16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNF775Q96BV0 537 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 LMF2Q9BU23 707 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-202ENST00000331148 WIPF3A6NGB9 483 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 NPIPB9F8W1W9 429 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 LRP3O75074 770 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 IGFBP3P17936 291 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 FSTP19883 344 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 EIF2S3P41091 472 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 CSNK1EP49674 416 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 TGIF1Q15583 401 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNHIT3Q15649 155 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 BTNL8Q6UX41 500 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 OR51A2Q8NGJ7 313 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 TCTEX1D2Q8WW35 142 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 ASB5Q8WWX0 329 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 KIRREL1Q96J84 757 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 AKR1E2Q96JD6 320 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 OR5AC2Q9NZP5 309 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 PILRAQ9UKJ1 303 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 PCOLCE2Q9UKZ9 415 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 DCDC2BA2VCK2 349 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 NUDT21O43809 227 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 APBB3O95704 486 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 IGLV3-19P01714 112 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 GUSBP08236 651 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 IFI6P09912 130 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 NQO2P16083 231 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 NME2P22392 152 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 AKT2P31751 481 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 HRH1P35367 487 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 PMELP40967 661 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 LSSP48449 732 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 MFGE8Q08431 387 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 KLHL26Q53HC5 615 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 PRSS54Q6PEW0 395 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 SLC35D2Q76EJ3 337 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 WDR92Q96MX6 357 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 AQP10Q96PS8 301 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 OR2M4Q96R27 311 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 KPTNQ9Y664 436 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 SPACA6W5XKT8 324 aa16.21■□□□□ 0.19
CLSTN3-202ENST00000331148 SCN2AQ99250 2005 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 PRAMEF26H0Y7S4 382 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 RENP00797 406 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 CD37P11049 281 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 LYL1P12980 280 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 CD1CP29017 333 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 ACTR1AP61163 376 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 ZNF260Q3ZCT1 412 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 JAGN1Q8N5M9 183 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 ZNF563Q8TA94 476 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 NKD1Q969G9 470 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 TAAR9Q96RI9 348 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 LPAR4Q99677 370 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 OCSTAMPQ9BR26 566 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 RSRP1Q9BUV0 290 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 SPTBP11277 2137 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 A0A1W2PPH5 198 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 FOXS1O43638 330 aa16.2■□□□□ 0.18
CLSTN3-202ENST00000331148 CD2P06729 351 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms