RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 IL2RAP01589 272 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 PTBP1P26599 531 aaKnown RBP eCLIP16.47■□□□□ 0.235e-6■■□□□ 13.8
EXOSC3-201ENST00000327304 DCTDP32321 178 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 OR10A3P58181 314 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 PMPCAQ10713 525 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 OXA1LQ15070 435 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 OR7E24Q6IFN5 339 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 XKRXQ6PP77 449 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 HTRA1Q92743 480 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 LINC00470Q9BZP3 86 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 CRLF2Q9HC73 371 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 GPR35Q9HC97 309 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 B3GAT2Q9NPZ5 323 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 OSGIN2Q9Y236 505 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 R4GMQ9 66 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 PHF3Q92576 2039 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 PRB1P04280 392 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 OCM2P0CE71 109 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 APEX1P27695 318 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 CDAP32320 146 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF79Q15937 498 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 CEP78Q5JTW2 689 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 RIPPLY2Q5TAB7 128 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 STEAP3Q658P3 488 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 FAM131AQ6UXB0 335 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 TFAP2EQ6VUC0 442 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 CATSPERDQ86XM0 798 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 LINC00346Q8IVM7 164 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 OR6K3Q8NGY3 331 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 COX4I2Q96KJ9 171 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 ZFP3Q96NJ6 502 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 RBM24Q9BX46 236 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 SRRQ9GZT4 340 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 SEC61A2Q9H9S3 476 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
EXOSC3-201ENST00000327304 INTS1Q8N201 2190 aaKnown RBP16.46■□□□□ 0.22
EXOSC3-201ENST00000327304 OR6C65A6NJZ3 312 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 ACOD1A6NK06 481 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 HPGDSO60760 199 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 KRT33AO76009 404 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 WNT11O96014 354 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 PNPP00491 289 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 CRHP06850 196 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 CA7P43166 264 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 EVX1P49640 407 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 FOXL2NBQ6ZUU3 175 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 SPATC1Q76KD6 591 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 UBE2J2Q8N2K1 259 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 GDPD1Q8N9F7 314 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 IL17RDQ8NFM7 739 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 STARD4Q96DR4 205 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 SLAMF6Q96DU3 332 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 SOSTQ9BQB4 213 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 SLITRK2Q9H156 845 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 POLE4Q9NR33 117 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 TRBV5-7A0A0A0MS05 114 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 H2BFMP0C1H6 154 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 EPXP11678 715 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 CASP6P55212 293 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 FOXG1P55316 489 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 LSM6P62312 80 aaKnown RBP16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 CEACAM16Q2WEN9 425 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 TRIM16LQ309B1 348 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 LRRC28Q86X40 367 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 OR2AJ1Q8NGZ0 328 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 DMRTA2Q96SC8 542 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 UPB1Q9UBR1 384 aa16.45■□□□□ 0.22
EXOSC3-201ENST00000327304 E9PLN8 166 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 OCMP0CE72 109 aaPredicted RBP16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 GUCA1AP43080 201 aaPredicted RBP16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 MMP16P51512 607 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 FAPQ12884 760 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 EIF2S3LQ2VIR3 472 aaKnown RBP16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 VKORC1Q9BQB6 163 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 TCF7L1Q9HCS4 588 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 MALT1Q9UDY8 824 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 GDF2Q9UK05 429 aaPredicted RBP16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 LHFPL6Q9Y693 200 aa16.44■□□□□ 0.22
EXOSC3-201ENST00000327304 A0A0G2JNJ9 132 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 ZNF587BE7ETH6 402 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 CGAP01215 116 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 ISG15P05161 165 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 ZNF84P51523 738 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 TLE1Q04724 770 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 MFGE8Q08431 387 aaPredicted RBP16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 RIN1Q13671 783 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 SLC25A35Q3KQZ1 300 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 C9orf135Q5VTT2 229 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 FBXW9Q5XUX1 488 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 CNIH2Q6PI25 160 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 CORO6Q6QEF8 472 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 NIPAL2Q9H841 368 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 EMC7Q9NPA0 242 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 CENPMQ9NSP4 180 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 Q9UFV3 132 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 POLR1DQ9Y2S0 133 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 MEMO1Q9Y316 297 aa16.43■□□□□ 0.22
EXOSC3-201ENST00000327304 RPL36A-HNRNPH2H7BZ11 118 aa16.42■□□□□ 0.22
EXOSC3-201ENST00000327304 CTSSP25774 331 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms