RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DCBLD2Q96PD2 775 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 TRIB1Q96RU8 372 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 HSFX1Q9UBD0 423 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 POLDIP2Q9Y2S7 368 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 GPX2P18283 190 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 YPEL5P62699 121 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 TSEN54Q7Z6J9 526 aaKnown RBP15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 PVRP15151 417 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 TRAPPC1Q9Y5R8 145 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 SLCO2B1O94956 709 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 FGF7P21781 194 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 SLC25A43Q8WUT9 341 aaPredicted RBP15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 ASIC5Q9NY37 505 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 ARFGAP1Q8N6T3 406 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 SCCPDHQ8NBX0 429 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 TM4SF18Q96CE8 201 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 HHIPQ96QV1 700 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 CSF3RQ99062 836 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 SLC23A1Q9UHI7 598 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 DOCK9Q9BZ29 2069 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 YOD1Q5VVQ6 348 aaPredicted RBP15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 PINX1Q96BK5 328 aaKnown RBP15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 SHISA4Q96DD7 197 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 JAM3Q9BX67 310 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 GPR31O00270 319 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 CD38P28907 300 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF511Q8NB15 262 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 LINC00597Q9H2U6 94 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 GALR2O43603 387 aaPredicted RBP15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 YKT6O15498 198 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 FBP1P09467 338 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 CEBPBP17676 345 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 PIGPP57054 158 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 PRTGQ2VWP7 1150 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 GALNT16Q8N428 558 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 GOT1L1Q8NHS2 421 aaPredicted RBP15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 FABP4P15090 132 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 RPA2P15927 270 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 EVX1P49640 407 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 BAP18Q8IXM2 172 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 OR2AK2Q8NG84 335 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 CTSFQ9UBX1 484 aa15.42■□□□□ 0.06
SMCHD1-201ENST00000320876 PDCD11Q14690 1871 aaKnown RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 TOMM20LQ6UXN7 152 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF813Q6ZN06 617 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 AKR7LQ8NHP1 331 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 CTRCQ99895 268 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 CTSLP07711 333 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 MMP11P24347 488 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 GP2P55259 537 aaKnown RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 MAT1AQ00266 395 aaKnown RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 FAM26EQ8N5C1 309 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 DTWD2Q8NBA8 298 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 PPP1R1CQ8WVI7 109 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 PDLIM7Q9NR12 457 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 EFSO43281 561 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 ARSAP15289 507 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 LBHQ53QV2 105 aaPredicted RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 PRAMEF20Q5VT98 475 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 MFSD12Q6NUT3 480 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 SLCO1B1Q9Y6L6 691 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF207O43670 478 aaKnown RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 GRPP07492 148 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 DHODHQ02127 395 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 BTAF1O14981 1849 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 IFITM5A6NNB3 132 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 A0A0B4J203 849 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 NID1P14543 1247 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 EN2P19622 333 aaPredicted RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 KCNJ3P48549 501 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 CTBSQ01459 385 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 CDKN3Q16667 212 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 RXFP4Q8TDU9 374 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 TEAD3Q99594 435 aa15.41■□□□□ 0.06
SMCHD1-201ENST00000320876 SDHAP31040 664 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 CTU2Q2VPK5 515 aaKnown RBP15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 UBAC2Q8NBM4 344 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 IKZF5Q9H5V7 419 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 CSNK1G1Q9HCP0 422 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 HS3ST2Q9Y278 367 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 PHOX2AO14813 284 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 MMP15P51511 669 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 TMEM174Q8WUU8 243 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 NOL4LQ96MY1 436 aaPredicted RBP15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 SYT11Q9BT88 431 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 CHST11Q9NPF2 352 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 AQP8O94778 261 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 EXT1Q16394 746 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 CYHR1Q6ZMK1 362 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 ARRDC2Q8TBH0 407 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 PTDSS2Q9BVG9 487 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 LRP3O75074 770 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 NDUFB7P17568 137 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF573Q86YE8 665 aa15.4■□□□□ 0.06
SMCHD1-201ENST00000320876 MYOFQ9NZM1 2061 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms