RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GDF9O60383 454 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 UBCP0CG48 685 aaKnown RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 CFPP27918 469 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 MFSD13AQ14CX5 517 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 PRAMEF20Q5VT98 475 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 GUSBP11Q6P575 273 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 C5orf46Q6UWT4 87 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 ANGPTL5Q86XS5 388 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 OR13C8Q8NGS7 320 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 RAB27BO00194 218 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF735P0CB33 412 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 VAMP1P23763 118 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 HSD11B1P28845 292 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 IKZF1Q13422 519 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 UNC119Q13432 240 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 SMUG1Q53HV7 270 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 LY6G6FQ5SQ64 297 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 PXDC1Q5TGL8 231 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 AWAT2Q6E213 333 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 LCN10Q6JVE6 187 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 PAQR4Q8N4S7 273 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 OR10S1Q8NGN2 331 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 FAM71F1Q96KD3 344 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 SLC25A21Q9BQT8 299 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 C1orf198Q9H425 327 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF768Q9H5H4 540 aaKnown RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 SDHAF3Q9NRP4 125 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 FAM206AQ9NX38 181 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 SRPK3Q9UPE1 567 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 RPH3AQ9Y2J0 694 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 MRPS17Q9Y2R5 130 aaKnown RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 RAMP1O60894 148 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 ISG15P05161 165 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 DCNP07585 359 aaKnown RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 CD34P28906 385 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 GK2Q14410 553 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 FAM74A1Q5RGS3 127 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 WDR74Q6RFH5 385 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF813Q6ZN06 617 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 OR1M1Q8NGA1 313 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 KIF25Q9UIL4 384 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 VSIG4Q9Y279 399 aa15.49■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF814B7Z6K7 855 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 B8ZZF3 427 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 SULT1C2O00338 296 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 LDLRAD4O15165 306 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 RLN2P04090 185 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 AKR1C4P17516 323 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 MMP16P51512 607 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 KCTD9Q7L273 389 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 PRSS42Q7Z5A4 293 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 ABHD12BQ7Z5M8 362 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-201ENST00000320755 UEVLDQ8IX04 471 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 CRB3Q9BUF7 120 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 SCPEP1Q9HB40 452 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 B3GAT1Q9P2W7 334 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 ASH2LQ9UBL3 628 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 NUP50Q9UKX7 468 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 DMDP11532 3685 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 RER1O15258 196 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 AQP8O94778 261 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 VSIG8P0DPA2 414 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 ANOS1P23352 680 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 ZP4Q12836 540 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 SMAD4Q13485 552 aaKnown RBP15.48■□□□□ 0.07
COL9A1-201ENST00000320755 C1orf100Q5SVJ3 147 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 GLRX5Q86SX6 157 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 OR2AJ1Q8NGZ0 328 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 SCARB1Q8WTV0 552 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 MARVELD3Q96A59 401 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 ZBTB8AQ96BR9 441 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 NICN1Q9BSH3 213 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 IFT46Q9NQC8 304 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 CYB5R1Q9UHQ9 305 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 RAB22AQ9UL26 194 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 SLC5A6Q9Y289 635 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 B3GALT5Q9Y2C3 310 aa15.48■□□□□ 0.07
COL9A1-201ENST00000320755 TEX51A0A1B0GUA7 166 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 OR5H14A6NHG9 310 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TTLL8A6PVC2 850 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 KCNAB3O43448 404 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 FOSL2P15408 326 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF20P17024 532 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 LAP3P28838 519 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 AVPR2P30518 371 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 HRH1P35367 487 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TUSC1Q2TAM9 212 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 RGS7BPQ6MZT1 257 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 BANF2Q9H503 90 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 UBE2ZQ9H832 354 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 CEP192Q8TEP8 1941 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TRAV14DV4A0A0A6YYC5 116 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 DISC1C4P0D8 188 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 PMP2P02689 132 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 SSBP1Q04837 148 aaKnown RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TMEM176BQ3YBM2 270 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 ZNF660Q6AZW8 331 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-201ENST00000320755 TMEM71Q6P5X7 295 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 NKAIN3Q8N8D7 197 aa15.47■□□□□ 0.07
COL9A1-201ENST00000320755 OR5D14Q8NGL3 314 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms