RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TDRD6O60522 2096 aaKnown RBP17.05■□□□□ 0.32
RTN4-201ENST00000317610 TMEM269A0A1B0GVZ9 245 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 NUDT19A8MXV4 375 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 SCGNO76038 276 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 THEGLP0DJG4 465 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 HRH1P35367 487 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 SLC22A6Q4U2R8 563 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 GRINAQ7Z429 371 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 OR4K17Q8NGC6 315 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 NUDCD2Q8WVJ2 157 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 TBL1XR1Q9BZK7 514 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 NMES1Q9C002 83 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 NRSN2Q9GZP1 204 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 FBLN5Q9UBX5 448 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 CARHSP1Q9Y2V2 147 aaKnown RBP17.05■□□□□ 0.32
RTN4-201ENST00000317610 LOC100509620A0A075B734 347 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 LOC101059948A0A1B0GTJ6 334 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 TCRBV21S2A2A0A5A6 115 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 H7C2Y5 167 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 P2RY10O00398 339 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 TPT1P13693 172 aaKnown RBP17.04■□□□□ 0.32
RTN4-201ENST00000317610 ZNF823P16415 610 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 MMP16P51512 607 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 SCRN3Q0VDG4 424 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 UNQ6126/PRO20091Q6UXV3 157 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 C9orf40Q8IXQ3 194 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 GTPBP8Q8N3Z3 284 aaPredicted RBP17.04■□□□□ 0.32
RTN4-201ENST00000317610 BOLLQ8N9W6 283 aaKnown RBP17.04■□□□□ 0.32
RTN4-201ENST00000317610 GPR119Q8TDV5 335 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 UQCC2Q9BRT2 126 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 SAV1Q9H4B6 383 aaPredicted RBP17.04■□□□□ 0.32
RTN4-201ENST00000317610 CHMP1AQ9HD42 196 aaPredicted RBP17.04■□□□□ 0.32
RTN4-201ENST00000317610 THADAQ6YHU6 1953 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 A6NIZ1 184 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 FTCDNL1E5RQL4 147 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 AHSA1O95433 338 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 PGAM2P15259 253 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 DRD1P21728 446 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 CX3CR1P49238 355 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 RAP1BP61224 184 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 RAP1AP62834 184 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 ZP2Q05996 745 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 SQSTM1Q13501 440 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 TDGQ13569 410 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 GUCA2BQ16661 112 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 DNM1P34Q6PK57 102 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 CHST4Q8NCG5 386 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 CASTOR1Q8WTX7 329 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 LRRC61Q9BV99 259 aa17.04■□□□□ 0.32
RTN4-201ENST00000317610 CDC14CA4D256 554 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 EEF1E1-BLOC1S5C9J1V9 151 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 OR2T1O43869 369 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 FADS1O60427 444 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 VSIG8P0DPA2 414 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 HLA-DOBP13765 273 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 VAMP1P23763 118 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 CCR5P51681 352 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 TAS2R31P59538 309 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 DCDP81605 110 aaKnown RBP17.03■□□□□ 0.32
RTN4-201ENST00000317610 HTRA3P83110 453 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 ELAVL1Q15717 326 aaKnown RBP17.03■□□□□ 0.32
RTN4-201ENST00000317610 DHRS7BQ6IAN0 325 aaPredicted RBP17.03■□□□□ 0.32
RTN4-201ENST00000317610 C5orf46Q6UWT4 87 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 KCTD9Q7L273 389 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 HOGA1Q86XE5 327 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 SLC22A24Q8N4F4 322 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 ASB10Q8WXI3 467 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 CDC6Q99741 560 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 RNF126Q9BV68 326 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 CYTL1Q9NRR1 136 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 CSAG2Q9Y5P2 127 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 SSX5O60225 188 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 ACTL6AO96019 429 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 MAOBP27338 520 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 FASLGP48023 281 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 NR0B1P51843 470 aaKnown RBP17.03■□□□□ 0.32
RTN4-201ENST00000317610 PLCXD2Q0VAA5 305 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 ZP4Q12836 540 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 OR52N4Q8NGI2 321 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 RNF133Q8WVZ7 376 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 FGGYQ96C11 551 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 OR11A1Q9GZK7 315 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 CHRNA10Q9GZZ6 450 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 UCK1Q9HA47 277 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 FAM206AQ9NX38 181 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 ZNF629Q9UEG4 869 aaPredicted RBP17.03■□□□□ 0.32
RTN4-201ENST00000317610 ANAPC10Q9UM13 185 aa17.03■□□□□ 0.32
RTN4-201ENST00000317610 AKR1C4P17516 323 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 SERPINF1P36955 418 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 HOXA1P49639 335 aaPredicted RBP17.02■□□□□ 0.32
RTN4-201ENST00000317610 BLKP51451 505 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 PNLIPRP2P54317 469 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 MICBQ29980 383 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 KIAA0895LQ68EN5 471 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 ZNF529Q6P280 563 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 LINC00346Q8IVM7 164 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 BAP18Q8IXM2 172 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 OR1M1Q8NGA1 313 aa17.02■□□□□ 0.32
RTN4-201ENST00000317610 ARL11Q969Q4 196 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms