RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 OPN4Q9UHM6 478 aa6.87□□□□□ -1.31
TPM3-203ENST00000312970 RPS6KA6Q9UK32 745 aa6.87□□□□□ -1.31
TPM3-203ENST00000312970 PPP1R3CQ9UQK1 317 aa6.87□□□□□ -1.31
TPM3-203ENST00000312970 COA3Q9Y2R0 106 aaPredicted RBP6.87□□□□□ -1.31
TPM3-203ENST00000312970 ENPP4Q9Y6X5 453 aa6.87□□□□□ -1.31
TPM3-203ENST00000312970 ARHGAP32A7KAX9 2087 aa6.87□□□□□ -1.31
TPM3-203ENST00000312970 OR6C6A6NF89 314 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 TRAPPC2LH3BP13 241 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 IFNL4K9M1U5 179 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 NME4O00746 187 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 FSHBP01225 129 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 H1F0P07305 194 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 CTLA4P16410 223 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 RGS6P49758 472 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 GSK3BP49841 420 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 KRR1Q13601 381 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 DGCR6Q14129 220 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 KCNMB1Q16558 191 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 CCDC92Q53HC0 331 aaPredicted RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 FAM209BQ5JX69 171 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 SLC27A4Q6P1M0 643 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 C1orf94Q6P1W5 598 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 C8orf82Q6P1X6 216 aaPredicted RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 RBMS3Q6XE24 437 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 HACD2Q6Y1H2 254 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 DPY19L2P2Q6ZN68 376 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 TSEN54Q7Z6J9 526 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 ZDHHC22Q8N966 263 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 ATG16L2Q8NAA4 619 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 OR1F12Q8NHA8 337 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 SGMS2Q8NHU3 365 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 ITLN1Q8WWA0 313 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 SLC7A6Q92536 515 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 DVL3Q92997 716 aaPredicted RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 POP5Q969H6 163 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 FAM162AQ96A26 154 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 RASD2Q96D21 266 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 ZMYND19Q96E35 227 aaPredicted RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 FAM46AQ96IP4 442 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 GPA33Q99795 319 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 KCTD14Q9BQ13 255 aaPredicted RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 CENPOQ9BU64 300 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 NUAK2Q9H093 628 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 SYT4Q9H2B2 425 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 POFUT1Q9H488 388 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 CCDC134Q9H6E4 229 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 MMP26Q9NRE1 261 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 DDX28Q9NUL7 540 aaKnown RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 GFOD1Q9NXC2 390 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 DCAF16Q9NXF7 216 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 VSX1Q9NZR4 365 aaPredicted RBP6.86□□□□□ -1.31
TPM3-203ENST00000312970 ASH2LQ9UBL3 628 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 AURKCQ9UQB9 309 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 SIGLEC7Q9Y286 467 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 IER3IP1Q9Y5U9 82 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 AUP1Q9Y679 476 aa6.86□□□□□ -1.31
TPM3-203ENST00000312970 UNC119BA6NIH7 251 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 TMEM178BH3BS89 294 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 SOCS2O14508 198 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 RER1O15258 196 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 GMNNO75496 209 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 TXNDC12O95881 172 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 CSTBP04080 98 aaKnown RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 WNT2P09544 360 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 NCK1P16333 377 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 CPT2P23786 658 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 CRABP1P29762 137 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 MDH2P40926 338 aaKnown RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 CDKN2AP42771 156 aaKnown RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 OMPP47874 163 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 CENPAP49450 140 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 RPS6KA3P51812 740 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 BTG1P62324 171 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 ZNF154Q13106 437 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 HLXQ14774 488 aaPredicted RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 PDCD1Q15116 288 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 ZMYND11Q15326 602 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 FGD3Q5JSP0 725 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 TOR2AQ5JU69 321 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 GLYATQ6IB77 296 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 FBXW12Q6X9E4 464 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 ADCK1Q86TW2 530 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 MUC20Q8N307 709 aaPredicted RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 DEFB108BQ8NET1 73 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 GJC3Q8NFK1 279 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 OR8G5Q8NG78 346 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 OR13G1Q8NGZ3 307 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 C22orf15Q8WYQ4 148 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 APOBEC3DQ96AK3 386 aaPredicted RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 CMTM5Q96DZ9 223 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 ZNF582Q96NG8 517 aaPredicted RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 OR2V2Q96R30 315 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 GPX7Q96SL4 187 aaPredicted RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 NUDT16L1Q9BRJ7 211 aaKnown RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 MRI1Q9BV20 369 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 GCM1Q9NP62 436 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 KRCC1Q9NPI7 259 aaPredicted RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 ESM1Q9NQ30 184 aa6.85□□□□□ -1.31
TPM3-203ENST00000312970 DCAF13Q9NV06 445 aaKnown RBP6.85□□□□□ -1.31
TPM3-203ENST00000312970 NDUFAF4Q9P032 175 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms