RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GGTLC2Q14390 218 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 TVP23CQ96ET8 276 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 MYOZ1Q9NP98 299 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 RAB27BO00194 218 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CD46P15529 392 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 HSF1Q00613 529 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 OR2A2Q6IF42 318 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 OR8U1Q8NH10 309 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ASB5Q8WWX0 329 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ARRDC3Q96B67 414 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 NTN4Q9HB63 628 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 A0A1W2PQD3 144 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 GJB3O75712 270 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 SLC14A1Q13336 389 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CRMP1Q14194 572 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF141Q15928 474 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CCL14Q16627 93 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 TOR2AQ5JU69 321 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 OR52W1Q6IF63 320 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CHRNA10Q9GZZ6 450 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 BMI1P35226 326 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 P2RY2P41231 377 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CLINT1Q14677 625 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 NR0B2Q15466 257 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 SYPL1Q16563 259 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 C17orf107Q6ZR85 190 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 USP36Q9P275 1121 aaKnown RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 FUT6P51993 359 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 POU3F1Q03052 451 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 FAM69BQ5VUD6 431 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 DEFB132Q7Z7B7 95 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 PGBD5Q8N414 524 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CHST14Q8NCH0 376 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 OR5M8Q8NGP6 311 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 OR52N5Q8NH56 324 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 PEX11GQ96HA9 241 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ERVMER34-1Q9H9K5 563 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 PTRH2Q9Y3E5 179 aaKnown RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 NKX2-2O95096 273 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 CDS2O95674 445 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ITGB8P26012 769 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 NKX2-1P43699 371 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ETFRF1Q6IPR1 90 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 TAS1R1Q7RTX1 841 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 PPP1R3BQ86XI6 285 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 FAM219AQ8IW50 185 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 JSRP1Q96MG2 331 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 NKX2-4Q9H2Z4 354 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 TNRC6AQ8NDV7 1962 aaKnown RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF77Q15935 545 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 MOGAT2Q3SYC2 334 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 ZFP82Q8N141 532 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 OR51S1Q8NGJ8 323 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 OXGR1Q96P68 337 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 DDOQ99489 341 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 CLDND1Q9NY35 253 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 EML5Q05BV3 1969 aa8.02□□□□□ -1.12
COL6A5-202ENST00000312481 DCDC2BA2VCK2 349 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 H7BYZ3 331 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PLXNB1O43157 2135 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PLRG1O43660 514 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SLC6A11P48066 632 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 LSM6P62312 80 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 EXOSC2Q13868 293 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PLCXD3Q63HM9 321 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 Q6ZSR6 202 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 TMEM178AQ8NBL3 297 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 OTOSQ8NHW6 89 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 CCDC120Q96HB5 630 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SYNPO2LQ9H987 977 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 FBXL2Q9UKC9 423 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 EMC9Q9Y3B6 208 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 TANC2Q9HCD6 1990 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 RIF1Q5UIP0 2472 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 RPS10-NUDT3A0A1W2PQS6 291 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 PMS2P1A4D2B8 440 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 STAG3L2P0CL84 134 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 FOLR1P15328 257 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 FGF7P21781 194 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 RPS10P46783 165 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 NKX2-5P52952 324 aaPredicted RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SMN1Q16637 294 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 C4orf17Q53FE4 359 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 STAC2Q6ZMT1 411 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 ZNF707Q96C28 371 aaPredicted RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 TMED7Q9Y3B3 224 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 TIMM10BQ9Y5J6 103 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SORBS2O94875 1100 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 GRPRP30550 384 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SNRPD2P62316 118 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 FER1L6-AS2Q96M78 137 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 MYOCOSA0A1B0GUC4 107 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SULT1A3P0DMM9 295 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 SULT1A4P0DMN0 295 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 HYAL2Q12891 473 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 VRK2Q86Y07 508 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 OCIAD1Q9NX40 245 aa8.02□□□□□ -1.13
COL6A5-202ENST00000312481 MYEF2Q9P2K5 600 aaKnown RBP8.02□□□□□ -1.13
COL6A5-202ENST00000312481 C1QAP02745 245 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms