RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 DOK1Q99704 481 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 OR10A2Q9H208 303 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 ZCCHC4Q9H5U6 513 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 ZFP64Q9NPA5 681 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 RLIMQ9NVW2 624 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 IL19Q9UHD0 177 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 RCE1Q9Y256 329 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 EMC9Q9Y3B6 208 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 ATG2AQ2TAZ0 1938 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 PRSS37A4D1T9 235 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 C4orf51C9J302 202 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SCGB2A1O75556 95 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SIX6O95475 246 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 UBBP0CG47 229 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 TDGF1P13385 188 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 CEACAM1P13688 526 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 ACHEP22303 614 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 PTGER4P35408 488 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 AQP2P41181 271 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 PRRX1P54821 245 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SIRPAP78324 504 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SRSF5Q13243 272 aaKnown RBP5.41□□□□□ -1.54
SEC22A-201ENST00000309934 EXOSC2Q13868 293 aaKnown RBP5.41□□□□□ -1.54
SEC22A-201ENST00000309934 EIF2B1Q14232 305 aaKnown RBP5.41□□□□□ -1.54
SEC22A-201ENST00000309934 GGTLC2Q14390 218 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 VAMP3Q15836 100 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 RNASE10Q5GAN6 216 aaKnown RBP5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SLC25A53Q5H9E4 307 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 ACER2Q5QJU3 275 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SHISA6Q6ZSJ9 500 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SPNS2Q8IVW8 549 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 C9orf40Q8IXQ3 194 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 LINC00052Q96N35 136 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 RASL10BQ96S79 203 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 CHODLQ9H9P2 273 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SEC61A2Q9H9S3 476 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SRA1Q9HD15 236 aaKnown RBP5.41□□□□□ -1.54
SEC22A-201ENST00000309934 NRIP3Q9NQ35 241 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 LRFN1Q9P244 771 aa5.41□□□□□ -1.54
SEC22A-201ENST00000309934 SERTM2A0A1B0GWG4 89 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SOCS6O14544 535 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 GCM2O75603 506 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 IGHMP01871 453 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ETV6P41212 452 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 CEBPDP49716 269 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 NOVA1P51513 510 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 PKIAP61925 76 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 POU3F1Q03052 451 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 MXD1Q05195 221 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 KIAA0141Q14154 515 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 CRMP1Q14194 572 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SHBQ15464 509 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM176BQ3YBM2 270 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SLC36A2Q495M3 483 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 PDZD11Q5EBL8 140 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 CLLU1Q5K131 121 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 LIPKQ5VXJ0 399 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TEX261Q6UWH6 196 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TMPPEQ6ZT21 453 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 GTF2H5Q6ZYL4 71 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 CEACAM19Q7Z692 300 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TUSC5Q8IXB3 177 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SELENOHQ8IZQ5 122 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM52Q8NDY8 209 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SDR9C7Q8NEX9 313 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 GJC3Q8NFK1 279 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 OR6K3Q8NGY3 331 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 OR2V1Q8NHB1 315 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 PFN4Q8NHR9 129 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SPRYD4Q8WW59 207 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TNFRSF14Q92956 283 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 YIPF6Q96EC8 236 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 C14orf79Q96F83 325 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 KCNJ15Q99712 375 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ATG101Q9BSB4 218 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 HINT2Q9BX68 163 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 NRSN2Q9GZP1 204 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 AICDAQ9GZX7 198 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 ENKD1Q9H0I2 346 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 GP6Q9HCN6 339 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TMEM74BQ9NUR3 256 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SLC7A11Q9UPY5 501 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 VDAC3Q9Y277 283 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 R4GN57 208 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 U3KQ87 197 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 KANTRA0A1W2PQU2 76 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 A0A1W2PRV1 198 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 TRIM77I1YAP6 450 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 K7ERU9 68 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 AQP8O94778 261 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 HCKP08631 526 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SPP1P10451 314 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 SPI1P17947 270 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 FGF9P31371 208 aaPredicted RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 HOXC5Q00444 222 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 RPL18Q07020 188 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 FUT5Q11128 374 aa5.4□□□□□ -1.54
SEC22A-201ENST00000309934 CNN3Q15417 329 aaKnown RBP5.4□□□□□ -1.54
SEC22A-201ENST00000309934 CTU2Q2VPK5 515 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms