RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FAM3DQ96BQ1 224 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 ELMOD3Q96FG2 381 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 FBXO34Q9NWN3 711 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 B4E171 279 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 LYRM1O43325 122 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 ACTL6AO96019 429 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 OR8U8P0C7N1 319 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 UBBP0CG47 229 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 TSPAN7P41732 249 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 MFGE8Q08431 387 aaPredicted RBP9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 BTNL3Q6UXE8 466 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 APOBEC3DQ96AK3 386 aaPredicted RBP9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 ZNF649Q9BS31 505 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 MAB21L2Q9Y586 359 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 A3GALT2U3KPV4 340 aa9.65□□□□□ -0.86
SYNPO2-201ENST00000307142 PHF1O43189 567 aaPredicted RBP9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 CSF3P09919 207 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 PRR35P0CG20 571 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 NKX6-1P78426 367 aaPredicted RBP9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 RTP5Q14D33 572 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 PLA1AQ53H76 456 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 MOB3BQ86TA1 216 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 RDH5Q92781 318 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 SLAMF9Q96A28 289 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 SLC25A37Q9NYZ2 338 aa9.65□□□□□ -0.87
SYNPO2-201ENST00000307142 IGFBP1P08833 259 aaPredicted RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 GALNSP34059 522 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 POLR2IP36954 125 aaKnown RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 KLF3P57682 345 aaPredicted RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 RAB4BP61018 213 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 CSRP2Q16527 193 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 OGFOD3Q6PK18 319 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 ZNF620Q6ZNG0 422 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 ZNF441Q8N8Z8 693 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SMIM3Q9BZL3 60 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 PLK3Q9H4B4 646 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 MYOZ1Q9NP98 299 aaPredicted RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SLCO1C1Q9NYB5 712 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SLC23A1Q9UHI7 598 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 RAC1P63000 192 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 EGR3Q06889 387 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TFAP2EQ6VUC0 442 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SSX9Q7RTT3 188 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 RDH10Q8IZV5 341 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 GABRG1Q8N1C3 465 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 OR2M7Q8NG81 312 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 OR1F12Q8NHA8 337 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TNFRSF12AQ9NP84 129 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SVILO95425 2214 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 A0A0U1RQK1 487 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 YIF1AO95070 293 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 PRPH2P23942 346 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 H2BFWTQ7Z2G1 175 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 MED6O75586 246 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 UBE2IP63279 158 aaKnown RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TNFAIP6P98066 277 aaPredicted RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 AQP6Q13520 282 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 LIPNQ5VXI9 398 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TIGD3Q6B0B8 471 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SLC36A1Q7Z2H8 476 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 C1orf123Q9NWV4 160 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 CPEP16870 476 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SPNS3Q6ZMD2 512 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 SPACA5Q96QH8 159 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 CMC2Q9NRP2 79 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TMEM74BQ9NUR3 256 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 A4GNTQ9UNA3 340 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TFP02787 698 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 RPS27P42677 84 aaKnown RBP9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 FHL5Q5TD97 284 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 PLXDC2Q6UX71 529 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 GLRX2Q9NS18 164 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 TREM2Q9NZC2 230 aa9.64□□□□□ -0.87
SYNPO2-201ENST00000307142 ABCA7Q8IZY2 2146 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 A0A1B0GTH9 108 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 ERP29P30040 261 aaKnown RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 HNF4GQ14541 408 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 GTPBP8Q8N3Z3 284 aaPredicted RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 PLPP5Q8NEB5 264 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 TM4SF19Q96DZ7 209 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 BCL2L10Q9HD36 194 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 TRGV10A0A0A0MS01 117 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 CD160O95971 181 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 CCL2P13500 99 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SMAP2Q8WU79 429 aaPredicted RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 DDA1Q9BW61 102 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 PSORS1C1Q9UIG5 152 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 ING1Q9UK53 422 aaPredicted RBP9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 LNP1A1A4G5 178 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 MASP2O00187 686 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 CT62P0C5K7 136 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 HNF1AP20823 631 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 GIFP27352 417 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 MICBQ29980 383 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SLC25A45Q8N413 288 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SAP25Q8TEE9 199 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 OR5B12Q96R08 314 aa9.63□□□□□ -0.87
SYNPO2-201ENST00000307142 SERTAD4Q9NUC0 356 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms