RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 MBNL2Q5VZF2 373 aaKnown RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LPCAT4Q643R3 524 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KCTD18Q6PI47 426 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PRSS57Q6UWY2 283 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DRAM2Q6UX65 266 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 BCDIN3DQ7Z5W3 292 aaKnown RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LRP11Q86VZ4 500 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR10S1Q8NGN2 331 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OTOSQ8NHW6 89 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KLF14Q8TD94 323 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ST7LQ8TDW4 575 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SORCS2Q96PQ0 1159 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MNTQ99583 582 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DOK1Q99704 481 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KCNJ15Q99712 375 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 APOL4Q9BPW4 351 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ABHD6Q9BV23 337 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 YIPF3Q9GZM5 350 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MS4A5Q9H3V2 200 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SP140LQ9H930 580 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PTTG3PQ9NZH4 202 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DNAJC27Q9NZQ0 273 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CGGBP1Q9UFW8 167 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 WARS2Q9UGM6 360 aaKnown RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NOTCH2Q04721 2471 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TANC2Q9HCD6 1990 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LOC100130705A0A1B0GUX0 176 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TMEM129A0AVI4 362 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF670-ZNF695F2Z2N8 137 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SSX4O60224 188 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ANXA2P07355 339 aaKnown RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CSF3P09919 207 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 HTR1FP30939 366 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MPV17P39210 176 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CX3CR1P49238 355 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PRKXP51817 358 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 EFNA4P52798 201 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TESK1Q15569 626 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MEDAGQ5VYS4 303 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CLEC2AQ6UVW9 174 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC35F2Q8IXU6 374 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CYGBQ8WWM9 190 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ASB17Q8WXJ9 295 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MARS2Q96GW9 593 aaKnown RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 Q96MF0 132 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF582Q96NG8 517 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 C1QTNF5Q9BXJ0 243 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TPK1Q9H3S4 243 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MYOZ1Q9NP98 299 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CYSLTR2Q9NS75 346 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MYEF2Q9P2K5 600 aaKnown RBP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 POLQO75417 2590 aa9.43□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CASQ2O14958 399 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TPD52L2O43399 206 aaKnown RBP9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TBX1O43435 398 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NDUFS7O75251 213 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 IGHV3-13P01766 116 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SELEP16581 610 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OTX1P32242 354 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LIPAP38571 399 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF81P51508 661 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 EFNB1P98172 346 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC34A1Q06495 639 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TMED1Q13445 227 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OGFRL1Q5TC84 451 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RHOUQ7L0Q8 258 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MRPL21Q7Z2W9 205 aaKnown RBP9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 Q96MT0 163 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MROQ9BYG7 248 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TTTY10Q9BZA0 68 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 VCX3BQ9H321 246 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 POFUT1Q9H488 388 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OPA3Q9H6K4 179 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NIPAL2Q9H841 368 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 FAM118AQ9NWS6 357 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CLN6Q9NWW5 311 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 HAO2Q9NYQ3 351 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 IKZF2Q9UKS7 526 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 STARD10Q9Y365 291 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 N6AMT1Q9Y5N5 214 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NAV2Q8IVL1 2488 aa9.42□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PDZD2O15018 2839 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CREBBPQ92793 2442 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 C17orf100A8MU93 164 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC16A6O15403 523 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 XRCC2O43543 280 aa9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 F12P00748 615 aaPredicted RBP9.41□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SBK2P0C263 348 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms