RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ZNF2Q9BSG1 426 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 LINC00597Q9H2U6 94 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TUBB1Q9H4B7 451 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RPH3ALQ9UNE2 315 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TDRD6O60522 2096 aaKnown RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RAB27BO00194 218 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 GPR12P47775 334 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 C17orf107Q6ZR85 190 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 SUCNR1Q9BXA5 334 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF391Q9UJN7 358 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ELLP55199 621 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 SUMO3P55854 103 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM128Q5BJH2 165 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 CMTM4Q8IZR5 234 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 FAM71CQ8NEG0 241 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 OR2AK2Q8NG84 335 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 OR5AP2Q8NGF4 316 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TOX2Q96NM4 488 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 GJB3O75712 270 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RRASP10301 218 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 CD37P11049 281 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 POLR2IP36954 125 aaKnown RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 SLC17A1Q14916 467 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TOMM34Q15785 309 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 DEFB133Q30KQ1 61 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM178AQ8NBL3 297 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 C20orf24Q9BUV8 137 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 OR51B6Q9H340 312 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 EPXP11678 715 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 HAGHQ16775 308 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TMEM183BQ1AE95 376 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 OR2W3Q7Z3T1 314 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TIMM10BQ9Y5J6 103 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 KNL1Q8NG31 2342 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 HMX2A2RU54 273 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 KLRC4-KLRK1H3BQV0 150 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF195O14628 629 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RGS13O14921 159 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 HIST1H1CP16403 213 aaKnown RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 PLA1AQ53H76 456 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 LDLRAD1Q5T700 205 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 STAC2Q6ZMT1 411 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 NTNG2Q96CW9 530 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 IP6K3Q96PC2 410 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 LRIT1Q9P2V4 623 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 V9GYS6 101 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TP53BP1Q12888 1972 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 FBP1P09467 338 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 FABP5Q01469 135 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 AQP6Q13520 282 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 RUNX2Q13950 521 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 NCR3LG1Q68D85 454 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 LINC00346Q8IVM7 164 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 ZFP62Q8NB50 900 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-201ENST00000302516 OR5D18Q8NGL1 313 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 APH1AQ96BI3 265 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 TXNIPQ9H3M7 391 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 POMT2Q9UKY4 750 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 NTNG1Q9Y2I2 539 aa6.97□□□□□ -1.29
SF3B3-201ENST00000302516 HOXC11O43248 304 aaPredicted RBP6.96□□□□□ -1.29
SF3B3-201ENST00000302516 FGF9P31371 208 aaPredicted RBP6.96□□□□□ -1.29
SF3B3-201ENST00000302516 CD80P33681 288 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 GABRA4P48169 554 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 CD81P60033 236 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 UBE2IP63279 158 aaKnown RBP6.96□□□□□ -1.29
SF3B3-201ENST00000302516 CTF1Q16619 201 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 LYRM7Q5U5X0 104 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 ZNF813Q6ZN06 617 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 SUMF1Q8NBK3 374 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 TMED6Q8WW62 240 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 SLC46A2Q9BY10 475 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 RALGAPA1Q6GYQ0 2036 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 KIAA0100Q14667 2235 aaKnown RBP6.96□□□□□ -1.29
SF3B3-201ENST00000302516 CDC14CA4D256 554 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 H0YIG0 161 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 HSPB6O14558 160 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 CBR1P16152 277 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 OR2T2Q6IF00 324 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 VAMP8Q9BV40 100 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 ABOP16442 354 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 FGF7P21781 194 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 BCORP1Q8N888 145 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 NLGN4YQ8NFZ3 816 aaPredicted RBP6.96□□□□□ -1.29
SF3B3-201ENST00000302516 C2CD4CQ8TF44 421 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 MACROD1Q9BQ69 325 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 CHST6Q9GZX3 395 aa6.96□□□□□ -1.29
SF3B3-201ENST00000302516 KNTC1P50748 2209 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 HEXAP06865 529 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 EN2P19622 333 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM99Q8N816 258 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 OR51F2Q8NH61 342 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 FGF13Q92913 245 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 MS4A6EQ96DS6 147 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ELOA3CA0A087WX78 387 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ABCD4O14678 606 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 ADAM5Q6NVV9 412 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 MORN4Q8NDC4 146 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 VN1R2Q8NFZ6 395 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 OIT3Q8WWZ8 545 aa6.96□□□□□ -1.3
SF3B3-201ENST00000302516 NXPE3Q969Y0 559 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms