RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ERVK-18Q9QC07 812 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 TEX13CA0A0J9YWL9 993 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 DOK2O60496 412 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 PPP1R3DO95685 299 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 FUT1P19526 365 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 CCNOP22674 350 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 RBMXP38159 391 aaKnown RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 ATPAF1Q5TC12 328 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 FAM122BQ7Z309 247 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 PATL1Q86TB9 770 aaKnown RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 MOGAT3Q86VF5 341 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 GLB1L2Q8IW92 636 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 Q8N7P7 452 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 AENQ8WTP8 325 aaKnown RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 ZNF583Q96ND8 569 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 GPX7Q96SL4 187 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 DNTTIP1Q9H147 329 aa5.3□□□□□ -1.56
ITGB1-201ENST00000302278 VSX1Q9NZR4 365 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 RPUSD1Q9UJJ7 312 aaKnown RBP5.3□□□□□ -1.56
ITGB1-201ENST00000302278 SMIM23A6NLE4 172 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 MCIDASD6RGH6 385 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 SGCEO43556 437 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 GMDSO60547 372 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 FAM20BO75063 409 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 AQP2P41181 271 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 MPP2Q14168 576 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 RSPO1Q2MKA7 263 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 FOXB2Q5VYV0 432 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 SLC35E4Q6ICL7 350 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 Q6ZTK2 550 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 VMO1Q7Z5L0 202 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 CALHM3Q86XJ0 350 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 OR11L1Q8NGX0 322 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 OR1F12Q8NHA8 337 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 C12orf43Q96C57 262 aaKnown RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 ZNF582Q96NG8 517 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 CDCA4Q9BXL8 241 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 TLNRD1Q9H1K6 362 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 SMURF1Q9HCE7 757 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 RAB18Q9NP72 206 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 CPSF4LA6NMK7 179 aaKnown RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 SLC9A3P48764 834 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 SGCAQ16586 387 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 EPGNQ6UW88 154 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 PFN4Q8NHR9 129 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 C16orf45Q96MC5 204 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 RBP7Q96R05 134 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 PCGF1Q9BSM1 259 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 CNTD2Q9H8S5 307 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 OOEPA6NGQ2 149 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 ERICH4A6NGS2 130 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 M0R1W7 72 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 NPFFO15130 113 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 UBE2E1P51965 193 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 EMX1Q04741 257 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 C11orf65Q8NCR3 313 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 OR9I1Q8NGQ6 314 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 PPP1R35Q8TAP8 253 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 TMEM239Q8WW34 195 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 LHX4Q969G2 390 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 TAMM41Q96BW9 452 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 HDHD2Q9H0R4 259 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 FN3KRPQ9HA64 309 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 TMEM100Q9NV29 134 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 ARGLU1Q9NWB6 273 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-201ENST00000302278 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 TMCC3Q9ULS5 477 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 MAB21L2Q9Y586 359 aa5.29□□□□□ -1.56
ITGB1-201ENST00000302278 F5H5P2 479 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 UBDO15205 165 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 SERPINI2O75830 405 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 DUS4LO95620 317 aaKnown RBP5.28□□□□□ -1.56
ITGB1-201ENST00000302278 TXNDC12O95881 172 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 VSIG8P0DPA2 414 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 HTR5AP47898 357 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 PRKCDQ05655 676 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 ALG10Q5BKT4 473 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 PAGE3Q5JUK9 113 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 HCP5Q6MZN7 132 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 KRT74Q7RTS7 529 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 RBM45Q8IUH3 476 aaKnown RBP5.28□□□□□ -1.56
ITGB1-201ENST00000302278 OR4F17Q8NGA8 305 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 OR4F4Q96R69 305 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 SERTAD4Q9NUC0 356 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 SLAMF8Q9P0V8 285 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 SLC13A4Q9UKG4 626 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 TRAV38-1A0A0B4J264 116 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 BLOC1S5-TXNDC5H3BN57 136 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 C3orf84H3BNL1 204 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 FBP2O00757 339 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 OPN1SWP03999 348 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 GABRA5P31644 462 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 TGM4P49221 684 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 DCTN2Q13561 401 aaKnown RBP5.28□□□□□ -1.56
ITGB1-201ENST00000302278 NCR3LG1Q68D85 454 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 OR10AD1Q8NGE0 317 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 TSPEARQ8WU66 669 aa5.28□□□□□ -1.56
ITGB1-201ENST00000302278 TMEM255BQ8WV15 326 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms