RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MRPS18BQ9Y676 258 aaKnown RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 SLCO1B1Q9Y6L6 691 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 VPS13AQ96RL7 3174 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 DOCK9Q9BZ29 2069 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 PGA4P0DJD7 388 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 PGA3P0DJD8 388 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 PGA5P0DJD9 388 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 PRLHRP49683 370 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 ERV3-1Q14264 604 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 NCR3LG1Q68D85 454 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 TMCO2Q7Z6W1 182 aaPredicted RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 ZNF547Q8IVP9 402 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 COX18Q8N8Q8 333 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 SLC25A21Q9BQT8 299 aaPredicted RBP12.96□□□□□ -0.33
CDT1-201ENST00000301019 ZDHHC5Q9C0B5 715 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 TMEM74BQ9NUR3 256 aa12.96□□□□□ -0.33
CDT1-201ENST00000301019 MDC1Q14676 2089 aaKnown RBP12.96□□□□□ -0.34
CDT1-201ENST00000301019 ZNF735P0CB33 412 aa12.96□□□□□ -0.34
CDT1-201ENST00000301019 CDKN2AP42771 156 aaKnown RBP12.96□□□□□ -0.34
CDT1-201ENST00000301019 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.34
CDT1-201ENST00000301019 UNQ9370/PRO34162Q6UXP9 181 aa12.96□□□□□ -0.34
CDT1-201ENST00000301019 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.34
CDT1-201ENST00000301019 OR2M4Q96R27 311 aa12.96□□□□□ -0.34
CDT1-201ENST00000301019 BCO1Q9HAY6 547 aa12.96□□□□□ -0.34
CDT1-201ENST00000301019 CACNA1DQ01668 2161 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 MED12Q93074 2177 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 CDRT15L2A8MXV6 281 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 TRGC1P0CF51 173 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 SOHLH1Q5JUK2 328 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 TMEM25Q86YD3 366 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 OR56A1Q8NGH5 318 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 GPBAR1Q8TDU6 330 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 FRZBQ92765 325 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 STACQ99469 402 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 SDF2Q99470 211 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 TBX21Q9UL17 535 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 CELSR3Q9NYQ7 3312 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 NRG2O14511 850 aaPredicted RBP12.95□□□□□ -0.34
CDT1-201ENST00000301019 IFNA10P01566 189 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 CXCL10P02778 98 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 CD200P41217 278 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 FRKP42685 505 aaPredicted RBP12.95□□□□□ -0.34
CDT1-201ENST00000301019 LANCL3Q6ZV70 420 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 COMMD4Q9H0A8 199 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 KLHL42Q9P2K6 505 aa12.95□□□□□ -0.34
CDT1-201ENST00000301019 AHSA1O95433 338 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 GABRA3P34903 492 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 DIO1P49895 249 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 CLDN6P56747 220 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 OR4N2Q8NGD1 307 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 OR1J1Q8NGS3 322 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 ASB16Q96NS5 453 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 MTHFD2LQ9H903 347 aaPredicted RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 FBXL21Q9UKT6 434 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 CBY1Q9Y3M2 126 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 ZNF106Q9H2Y7 1883 aaKnown RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 EIF1AYO14602 144 aaKnown RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 EFSO43281 561 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 GLCEO94923 617 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 MMP9P14780 707 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 BCL6P41182 706 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 EMDP50402 254 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 MEP1BQ16820 701 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 GRASPQ7Z6J2 395 aaPredicted RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 NECAP1Q8NC96 275 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 OR9K2Q8NGE7 335 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 ABHD14AQ9BUJ0 271 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 CNTNAP3Q9BZ76 1288 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 C1orf198Q9H425 327 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 CWH43Q9H720 699 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 SEC16AO15027 2179 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 SNRNP200O75643 2136 aaKnown RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 LOC100289279A0A1B0GTE1 492 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 C11orf98E9PRG8 122 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 F8VVB4 439 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 F8VWA3 439 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 GPRIN2O60269 458 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 CD33P20138 364 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 HIST1H1TP22492 207 aaPredicted RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 UBE2KP61086 200 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 TOMM34Q15785 309 aaPredicted RBP12.94□□□□□ -0.34
CDT1-201ENST00000301019 DEFB134Q4QY38 66 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 TANGO2Q6ICL3 276 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 HEPN1Q6WQI6 88 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 C5orf24Q7Z6I8 188 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 SYS1Q8N2H4 156 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 OR2L5Q8NG80 312 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 ERGIC1Q969X5 290 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 REEP6Q96HR9 211 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 SMIM8Q96KF7 97 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 DDA1Q9BW61 102 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 ZNF700Q9H0M5 742 aa12.94□□□□□ -0.34
CDT1-201ENST00000301019 SEC14L6B5MCN3 397 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms