RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PTBP1P26599 531 aaKnown RBP eCLIP13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 TALDO1P37837 337 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 EVX1P49640 407 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 XKRXQ6PP77 449 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 RBMXL3Q8N7X1 1067 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 SAMD12Q8N8I0 201 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF671Q8TAW3 534 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 ABCB10Q9NRK6 738 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 CLCF1Q9UBD9 225 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ISPDA4D126 451 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 F5H5K5 113 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 DOK2O60496 412 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 OTX1P32242 354 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC6A9P48067 706 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 NUFIP2Q7Z417 695 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 COMMD2Q86X83 199 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 OR8B12Q8NGG6 310 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 TRIB1Q96RU8 372 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 GFI1Q99684 422 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF275Q9NSD4 429 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 N6AMT1Q9Y5N5 214 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 FRYQ5TBA9 3013 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SYNGR3O43761 229 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 PAHP00439 452 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC2A1P11166 492 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF32P17041 273 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ADRA2CP18825 462 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 UCNP55089 124 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ARF1P84077 181 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 IFITM3Q01628 133 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF79Q15937 498 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC36A2Q495M3 483 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 Q6ZNX1 250 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 FAM57BQ71RH2 274 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF627Q7L945 461 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SNX29P2Q8IUI4 249 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SKA3Q8IX90 412 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 OR1F12Q8NHA8 337 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 OR51E1Q8TCB6 317 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 PGAM5Q96HS1 289 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 CMTM3Q96MX0 182 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 SPATA2Q9UM82 520 aa13.78□□□□□ -0.2
HERPUD1-201ENST00000300302 LAMA5O15230 3695 aa13.77□□□□□ -0.2
HERPUD1-201ENST00000300302 MEGF11A6BM72 1044 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 TTLL8A6PVC2 850 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 AHRRA9YTQ3 701 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 M0R135 149 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 SS18L1O75177 396 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 ELK1P19419 428 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 TPTEP56180 551 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 TMPRSS3P57727 454 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 FAPQ12884 760 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.212e-6■■■■□ 20
HERPUD1-201ENST00000300302 HES5Q5TA89 166 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 SERPINA12Q8IW75 414 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 GDPD1Q8N9F7 314 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 ZNF799Q96GE5 643 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 ABHD17AQ96GS6 310 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 OR2H1Q9GZK4 316 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 C12orf49Q9H741 205 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 CYSLTR2Q9NS75 346 aa13.77□□□□□ -0.21
HERPUD1-201ENST00000300302 NCOA6Q14686 2063 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 C1QTNF9BB2RNN3 333 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 K7EM74 188 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 APOA1P02647 267 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 C1QTNF9P0C862 333 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 CALCBP10092 127 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 SNRPBP14678 240 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 IGFBP3P17936 291 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 IL18Q14116 193 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 TBR1Q16650 682 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 PLEKHN1Q494U1 663 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 FBXW9Q5XUX1 488 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 DRAM2Q6UX65 266 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 DOK3Q7L591 496 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 PRSS45Q7RTY3 260 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 LYSMD2Q8IV50 215 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 OR8H2Q8N162 312 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 OR5M9Q8NGP3 310 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 LIN7BQ9HAP6 207 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 SLC17A5Q9NRA2 495 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 TAS2R4Q9NYW5 299 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 EXTL2Q9UBQ6 330 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 MALT1Q9UDY8 824 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 OR6C6A6NF89 314 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 CCL1P22362 96 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 CRYGSP22914 178 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 OR3A2P47893 321 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 PSG4Q00888 419 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 STEAP3Q658P3 488 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 GLT8D1Q68CQ7 371 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 FGD2Q7Z6J4 655 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 DNAAF1Q8NEP3 725 aa13.76□□□□□ -0.21
HERPUD1-201ENST00000300302 OR52H1Q8NGJ2 320 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms