RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 BIDP55957 195 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 SEC61A1P61619 476 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 SLC35D3Q5M8T2 416 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 LIN54Q6MZP7 749 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF627Q7L945 461 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 GRINAQ7Z429 371 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 DCXRQ7Z4W1 244 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 DNASE2BQ8WZ79 361 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 SEC22AQ96IW7 307 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 DOCK7Q96N67 2140 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF251Q9BRH9 671 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 HRASLSQ9HDD0 168 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 MRPL22Q9NWU5 206 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 KLHL13Q9P2N7 655 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 TPRP12270 2363 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF705EA8MWA4 302 aaPredicted RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 FARS2O95363 451 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 EPHA8P29322 1005 aaPredicted RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 AKR1C3P42330 323 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 PTH2RP49190 550 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 PNLIPRP2P54317 469 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 NR0B2Q15466 257 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 OR51A2Q8NGJ7 313 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 SLC25A38Q96DW6 304 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 S100A16Q96FQ6 103 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 ABHD6Q9BV23 337 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 KIF25Q9UIL4 384 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 TRAV18A0A075B6X5 111 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 UBL3O95164 117 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 COX5BP10606 129 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF41P51814 821 aaPredicted RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 GGTLC2Q14390 218 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 TAF13Q15543 124 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 PABPC1L2AQ5JQF8 200 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 DCAF12L2Q5VW00 463 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 RHBDD2Q6NTF9 364 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 OVCH2Q7RTZ1 564 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 CDC20BQ86Y33 519 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
FOXN4-201ENST00000299162 MRPS24Q96EL2 167 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 PRMT8Q9NR22 394 aaPredicted RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 PTRH2Q9Y3E5 179 aaKnown RBP9.04□□□□□ -0.96
FOXN4-201ENST00000299162 SVILO95425 2214 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 ADAMTS9Q9P2N4 1935 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 G3V3Q6 166 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 AIPO00170 330 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 P2RY10O00398 339 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 CCSO14618 274 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 FADS1O60427 444 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 KIR3DL2P43630 455 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 CCR9P51686 369 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 LUMP51884 338 aaPredicted RBP9.03□□□□□ -0.96
FOXN4-201ENST00000299162 PRSS12P56730 875 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 DCAF7P61962 342 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 RPS18P62269 152 aaKnown RBP9.03□□□□□ -0.96
FOXN4-201ENST00000299162 PITPNAQ00169 270 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
FOXN4-201ENST00000299162 RAB12Q6IQ22 244 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 SEZ6L2Q6UXD5 910 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 UNQ6126/PRO20091Q6UXV3 157 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 FAM219AQ8IW50 185 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 OTOSQ8NHW6 89 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 IFI44Q8TCB0 444 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 GPR148Q8TDV2 347 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF75AQ96N20 296 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 CMKLR1Q99788 373 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TREM1Q9NP99 234 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 CEP192Q8TEP8 1941 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TRAV1-2A0A0B4J238 106 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 VSTM2BA6NLU5 285 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 DBX1A6NMT0 343 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 OR4C45A6NMZ5 311 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 PYCARD-AS1I3L0S3 204 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 PLPP3O14495 311 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TXNL1O43396 289 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 RAMP1O60894 148 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 G0S2P27469 103 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 SGCBQ16585 318 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TRIM61Q5EBN2 209 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 SLC22A10Q63ZE4 541 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TMEM225Q6GV28 225 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 SLC18B1Q6NT16 456 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TMEM205Q6UW68 189 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 OR1S1Q8NH92 325 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 HGDQ93099 445 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 GNRHR2Q96P88 292 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 UBL7Q96S82 380 aaPredicted RBP9.03□□□□□ -0.96
FOXN4-201ENST00000299162 ATG5Q9H1Y0 275 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 GPN1Q9HCN4 374 aaPredicted RBP9.03□□□□□ -0.96
FOXN4-201ENST00000299162 TAS2R4Q9NYW5 299 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 ABRACLQ9P1F3 81 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 SRPK3Q9UPE1 567 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 LRP12Q9Y561 859 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 COL4A2P08572 1712 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 AGPAT2O15120 278 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 GPRIN2O60269 458 aa9.03□□□□□ -0.96
FOXN4-201ENST00000299162 ART1P52961 327 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms