RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ZNF747Q9BV97 191 aa16.44■□□□□ 0.22
CXCL3-201ENST00000296026 SSBP3Q9BWW4 388 aaPredicted RBP16.44■□□□□ 0.22
CXCL3-201ENST00000296026 MS4A7Q9GZW8 240 aaPredicted RBP16.44■□□□□ 0.22
CXCL3-201ENST00000296026 WDR76Q9H967 626 aa16.44■□□□□ 0.22
CXCL3-201ENST00000296026 ZMAT3Q9HA38 289 aaKnown RBP16.44■□□□□ 0.22
CXCL3-201ENST00000296026 IGLV1-36A0A0B4J1U3 117 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 IQCF6A8MYZ5 107 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 F5H5P2 479 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 WIPF1O43516 503 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 CPT2P23786 658 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 PSME3P61289 254 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 PAX2Q02962 417 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 KRT72Q14CN4 511 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 MOGAT3Q86VF5 341 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 KLBQ86Z14 1044 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 OR52E2Q8NGJ4 325 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 FUZQ9BT04 418 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 SRA1Q9HD15 236 aaKnown RBP16.43■□□□□ 0.22
CXCL3-201ENST00000296026 DCAF13Q9NV06 445 aaKnown RBP16.43■□□□□ 0.22
CXCL3-201ENST00000296026 MIOXQ9UGB7 285 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 B9D1Q9UPM9 204 aa16.43■□□□□ 0.22
CXCL3-201ENST00000296026 SAMD4AQ9UPU9 718 aaKnown RBP16.43■□□□□ 0.22
CXCL3-201ENST00000296026 GNB2P62879 340 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 DBPQ10586 325 aaPredicted RBP16.42■□□□□ 0.22
CXCL3-201ENST00000296026 COX10Q12887 443 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 RSPO1Q2MKA7 263 aaPredicted RBP16.42■□□□□ 0.22
CXCL3-201ENST00000296026 LEG1Q6P5S2 330 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 SHISA2Q6UWI4 295 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 BTNL3Q6UXE8 466 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 OR6V1Q8N148 313 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 PARP8Q8N3A8 854 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 FANK1Q8TC84 345 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 NEIL1Q96FI4 390 aaPredicted RBP16.42■□□□□ 0.22
CXCL3-201ENST00000296026 DHRS1Q96LJ7 313 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 NMNAT3Q96T66 252 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 TMEM246Q9BRR3 403 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 HCAR1Q9BXC0 346 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 ZNF446Q9NWS9 450 aa16.42■□□□□ 0.22
CXCL3-201ENST00000296026 IGHV3OR16-10A0A075B7F0 116 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 LRRC30A6NM36 301 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 TMPRSS2O15393 492 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 RENP00797 406 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 HLA-DPB1P04440 258 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 IGHV4-38-2P0DP08 117 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 SELEP16581 610 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 PRSS12P56730 875 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 ZNF181Q2M3W8 571 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 RFX4Q33E94 735 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 FAM201AQ5SY85 155 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 LRRN1Q6UXK5 716 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 CFAP77Q6ZQR2 320 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 COLCA1Q6ZS62 124 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 JAZF1Q86VZ6 243 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 LINC00346Q8IVM7 164 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 SLC26A10Q8NG04 563 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 PLEKHA8Q96JA3 519 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 OR52D1Q9H346 318 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 SPAG4Q9NPE6 437 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 TMEM100Q9NV29 134 aa16.41■□□□□ 0.22
CXCL3-201ENST00000296026 IGHV2-70DA0A0C4DH43 119 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 F5H5K5 113 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 GMNNO75496 209 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 RNASE1P07998 156 aaKnown RBP16.4■□□□□ 0.22
CXCL3-201ENST00000296026 PPIAL4GP0DN37 164 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 FPR3P25089 353 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 SLC6A6P31641 620 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 MDH1P40925 334 aaKnown RBP16.4■□□□□ 0.22
CXCL3-201ENST00000296026 PMELP40967 661 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 ZNF404Q494X3 552 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 SLC18B1Q6NT16 456 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 C1orf87Q8N0U7 546 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 RNF148Q8N7C7 305 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 OR4K13Q8NH42 304 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 RAB40AQ8WXH6 277 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 SLC25A28Q96A46 364 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 UPRTQ96BW1 309 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 PITX2Q99697 317 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 RPRD1BQ9NQG5 326 aaKnown RBP16.4■□□□□ 0.22
CXCL3-201ENST00000296026 ADA2Q9NZK5 511 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 SOX21Q9Y651 276 aaPredicted RBP16.4■□□□□ 0.22
CXCL3-201ENST00000296026 V9GYQ6 96 aa16.4■□□□□ 0.22
CXCL3-201ENST00000296026 A0A1B0GWJ7 208 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 ARPC3O15145 178 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 GADD45GO95257 159 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 FSTL3O95633 263 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 ACSM4P0C7M7 580 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 HIST1H1CP16403 213 aaKnown RBP16.39■□□□□ 0.21
CXCL3-201ENST00000296026 MTNR1AP48039 350 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 SMIM11AP58511 58 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 SPIBQ01892 262 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 GK2Q14410 553 aaPredicted RBP16.39■□□□□ 0.21
CXCL3-201ENST00000296026 KRTAP27-1Q3LI81 207 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 SLC36A3Q495N2 470 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 HSP90B2PQ58FF3 399 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 PRR31Q5SQ13 230 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 C9orf139Q6ZV77 190 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 NLRC3Q7RTR2 1065 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 NAA40Q86UY6 237 aa16.39■□□□□ 0.21
CXCL3-201ENST00000296026 OR8B3Q8NGG8 313 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms