RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 BANF2Q9H503 90 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 ASF1BQ9NVP2 202 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 TCRBV5S2A0A599 114 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 B4E171 279 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 SHISA8B8ZZ34 492 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 TSPAN7P41732 249 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 ETV1P50549 477 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 HCCSP53701 268 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 FZD5Q13467 585 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 PBOV1Q9GZY1 135 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLCO1B1Q9Y6L6 691 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 KITLGP21583 273 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 CISD2Q8N5K1 135 aaKnown RBP15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR10J5Q8NHC4 309 aa15.98■□□□□ 0.15
CDC42EP3-201ENST00000295324 RNLSQ5VYX0 342 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 DESI1Q6ICB0 168 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 NOXA1Q86UR1 476 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLC35B4Q969S0 331 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 C3orf49Q96BT1 292 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 MALSU1Q96EH3 234 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR2M2Q96R28 347 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 PLEKHF2Q9H8W4 249 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 IGHV3-64DA0A0J9YX35 117 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 CNIH1O95406 144 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 CNTNAP3BQ96NU0 1288 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 LILRB5O75023 590 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 TFAP2AP05549 437 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 CALCBP10092 127 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 FAM185AQ8N0U4 392 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 NMNAT2Q9BZQ4 307 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 NAA50Q9GZZ1 169 aaKnown RBP15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLA2Q9H6Q3 261 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 NRXN2Q9P2S2 1712 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 DDOSTP39656 456 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 ACSM1Q08AH1 577 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 DOC2BQ14184 412 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 BATFQ16520 125 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 STEAP3Q658P3 488 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 CALHM3Q86XJ0 350 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 GCNT2Q8N0V5 402 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 NEU3Q9UQ49 428 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 FAM96BQ9Y3D0 163 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 LYPD4Q6UWN0 246 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 RDH10Q8IZV5 341 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 ARL11Q969Q4 196 aa15.97■□□□□ 0.15
CDC42EP3-201ENST00000295324 A6NHS1 94 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 MSTNO14793 375 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 RPS27P42677 84 aaKnown RBP15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 GK2Q14410 553 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 LAX1Q8IWV1 398 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR10D3Q8NH80 312 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 AKR7LQ8NHP1 331 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZMAT3Q9HA38 289 aaKnown RBP15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF674Q2M3X9 581 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 MDGA2Q7Z553 956 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR4D6Q8NGJ1 314 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 CDCA4Q9BXL8 241 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 WDR54Q9H977 334 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 SOX8P57073 446 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLC35A2P78381 396 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 NKX6-1P78426 367 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 KHDC1LQ5JSQ8 128 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 TMPRSS11FQ6ZWK6 438 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 RASL10BQ96S79 203 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF816-ZNF321PA0A0X1KG74 233 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 GALNSP34059 522 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 LIPAP38571 399 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF136P52737 540 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 WNT3P56703 355 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ANKRD34AQ69YU3 496 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 FAHD1Q6P587 224 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 FGF11Q92914 225 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ITPKCQ96DU7 683 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF764Q96H86 408 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 C19orf12Q9NSK7 152 aa15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 DNAJB12Q9NXW2 375 aaKnown RBP15.96■□□□□ 0.15
CDC42EP3-201ENST00000295324 MEIKINA0A087WXM9 373 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 HSBP1L1C9JCN9 74 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 DEFA4P12838 97 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 RAB11AP62491 216 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 BATF2Q8N1L9 274 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 DLEC1Q9Y238 1755 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF705FA8MVS1 300 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 EML2O95834 649 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF705DP0CH99 300 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF705BP0CI00 300 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 TPT1P13693 172 aaKnown RBP15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 SSTP61278 116 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 OR1F12Q8NHA8 337 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 PLK3Q9H4B4 646 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 GABARAPO95166 117 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF468Q5VIY5 522 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 OGFOD3Q6PK18 319 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 MBOAT4Q96T53 435 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 TUBG2Q9NRH3 451 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 PTPN6P29350 595 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 ZNF141Q15928 474 aa15.95■□□□□ 0.14
CDC42EP3-201ENST00000295324 B3GNTL1Q67FW5 361 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms