RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ZNF716A6NP11 495 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 NKX2-8O15522 239 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 DOK2O60496 412 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 F10P00742 488 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 ACSM4P0C7M7 580 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 MSR1P21757 451 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 DDOSTP39656 456 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 POU3F4P49335 361 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 LHX2P50458 406 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 SRSF6Q13247 344 aaKnown RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 BCL2A1Q16548 175 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 TBRG1Q3YBR2 411 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 PLA1AQ53H76 456 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 VASH2Q86V25 355 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 NKAIN3Q8N8D7 197 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 FAM3DQ96BQ1 224 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 NELFAQ9H3P2 528 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 PLEKHA1Q9HB21 404 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 ACKR4Q9NPB9 350 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 B4GALT7Q9UBV7 327 aa8.08□□□□□ -1.12
PDPN-201ENST00000294489 NUFIP1Q9UHK0 495 aaKnown RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 TNRC6AQ8NDV7 1962 aaKnown RBP8.08□□□□□ -1.12
PDPN-201ENST00000294489 A0A1B0GVI7 797 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ACOT7O00154 380 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 RER1O15258 196 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 DHFRP00374 187 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 TTRP02766 147 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 GSTT2BP0CG30 244 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 POU3F2P20265 443 aaPredicted RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 HTR2CP28335 458 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 PTH2RP49190 550 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ZNF84P51523 738 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 PRKXP51817 358 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 BTG1P62324 171 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 GRB2P62993 217 aaKnown RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 C2orf76Q3KRA6 126 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ASPHD2Q6ICH7 369 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 LINC00696Q6ZRV3 163 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 OR6M1Q8NGM8 313 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 SLC7A6Q92536 515 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 FOXRED1Q96CU9 486 aaPredicted RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 ULBP2Q9BZM5 246 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 AUNIPQ9H7T9 357 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 SLC17A5Q9NRA2 495 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ZNF275Q9NSD4 429 aaPredicted RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 RCE1Q9Y256 329 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ALG5Q9Y673 324 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 A0A0B4J293 547 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 DHHO43323 396 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 XRCC3O43542 346 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 CYTIPO60759 359 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ZNF708P17019 499 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 GNALP38405 381 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 CAPZA1P52907 286 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 CLDN18P56856 261 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 TAS2R20P59543 309 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 CBX3Q13185 183 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 KLF9Q13886 244 aaPredicted RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 GLYATL3Q5SZD4 288 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 PDSS1Q5T2R2 415 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 MTFR2Q6P444 385 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ANKRD16Q6P6B7 361 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 C20orf196Q8IYI0 205 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 JAGN1Q8N5M9 183 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 TMEM251Q8N6I4 163 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 GJC3Q8NFK1 279 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 OR52I2Q8NH67 350 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 SLC39A7Q92504 469 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ZNF416Q9BWM5 594 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 RBM24Q9BX46 236 aaKnown RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 CACNG6Q9BXT2 260 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 DDX28Q9NUL7 540 aaKnown RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 NUBP2Q9Y5Y2 271 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 IGKV3D-15A0A087WSY6 115 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 DCDC2BA2VCK2 349 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 KLRC4-KLRK1H3BQV0 150 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ARSBP15848 533 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 BTCP35070 178 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 SELENOPP49908 381 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 SPOCK1Q08629 439 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 ATAD3CQ5T2N8 411 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 FAM166AQ6J272 317 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 COMMD2Q86X83 199 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 OR5D14Q8NGL3 314 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 OR10D3Q8NH80 312 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 CPNE4Q96A23 557 aaPredicted RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 TMEM45BQ96B21 275 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 FGGYQ96C11 551 aa8.07□□□□□ -1.12
PDPN-201ENST00000294489 MOV10Q9HCE1 1003 aaKnown RBP8.07□□□□□ -1.12
PDPN-201ENST00000294489 PHF3Q92576 2039 aaKnown RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 NAP1L6A6NFF2 107 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 GGT3PA6NGU5 568 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 ZNF891A8MT65 544 aaPredicted RBP8.06□□□□□ -1.12
PDPN-201ENST00000294489 CXCL13O43927 109 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 TCRBP04435 133 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 CD46P15529 392 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 GIFP27352 417 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 MEOX1P50221 254 aa8.06□□□□□ -1.12
PDPN-201ENST00000294489 ZNF121P58317 390 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms