RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TMEM11P17152 192 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 ATF1P18846 271 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 C16orf52Q8NHV5 167 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SMIM4Q8WVI0 70 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 TVP23CQ96ET8 276 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 SCPEP1Q9HB40 452 aa13.92□□□□□ -0.18
SHROOM4-201ENST00000289292 LRP3O75074 770 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 NTN1O95631 604 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 S100A8P05109 93 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 IL34Q6ZMJ4 242 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 WDR88Q6ZMY6 472 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 GJC3Q8NFK1 279 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 FGF21Q9NSA1 209 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 MED9Q9NWA0 146 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 MYOTQ9UBF9 498 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 FZD6O60353 706 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 CLN5O75503 358 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 OR2J2O76002 312 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 FABP6P51161 128 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 MVDP53602 400 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 PBOV1Q9GZY1 135 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 ZCCHC4Q9H5U6 513 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 C20orf141Q9NUB4 165 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 MED19A0JLT2 244 aaPredicted RBP13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 EGR3Q06889 387 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 BCL2L10Q9HD36 194 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 TMEM184BQ9Y519 407 aaPredicted RBP13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 PPP5D1E7EU14 171 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 MT-ND4LP03901 98 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 ECI1P42126 302 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 HABP2Q14520 560 aaPredicted RBP13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 SLC17A1Q14916 467 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 IGSF11Q5DX21 431 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 CDCA3Q99618 268 aaPredicted RBP13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 C6orf106Q9H6K1 298 aaPredicted RBP13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 PRSS37A4D1T9 235 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 SYS1Q8N2H4 156 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 ZNF561Q8N587 486 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 OR10J5Q8NHC4 309 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 VPS25Q9BRG1 176 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 CHRNA9Q9UGM1 479 aa13.91□□□□□ -0.18
SHROOM4-201ENST00000289292 LEUTXA8MZ59 168 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 ST8SIA3O43173 380 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 GLAP06280 429 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CDAP32320 146 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 TM4SF4P48230 202 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 AGBL4Q5VU57 503 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 LINC00696Q6ZRV3 163 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 GPR32P1Q8NGA4 272 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 SIGLEC11Q96RL6 698 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 HIPK2Q9H2X6 1198 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 KCNK15Q9H427 330 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 PHOX2AO14813 284 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CHRM2P08172 466 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 ST6GAL1P15907 406 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 TMEM268Q5VZI3 342 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 ARIH2OSQ8N7S6 290 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CXorf58Q96LI9 332 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 LINC00052Q96N35 136 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 DLL4Q9NR61 685 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CYSLTR2Q9NS75 346 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 HIF1ANQ9NWT6 349 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 NPBWR1P48145 328 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CDK5Q00535 292 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 MRPL58Q14197 206 aaKnown RBP13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 SPANXN5Q5MJ07 72 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 OR2T2Q6IF00 324 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 DND1Q8IYX4 353 aaKnown RBP13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 OR51F2Q8NH61 342 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 RHOFQ9HBH0 211 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 BOKQ9UMX3 212 aaPredicted RBP13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 R4GMQ9 66 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 DEGS1O15121 323 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 SCGB2A1O75556 95 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 JTBO76095 146 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CCR2P41597 374 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 OR5AP2Q8NGF4 316 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 OR2G2Q8NGZ5 317 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 OR4F5Q8NH21 305 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 RPUSD4Q96CM3 377 aaKnown RBP13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 OR4F4Q96R69 305 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CRLF2Q9HC73 371 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 MMACHCQ9Y4U1 282 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 KCNE1BA0A087WTH5 132 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 A0A1B0GTH9 108 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 TLCD2A6NGC4 264 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 CBY3A6NI87 242 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 NUDT19A8MXV4 375 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 PPP2CBP62714 309 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 PPP2CAP67775 309 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 MRPS21P82921 87 aaKnown RBP13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 KIAA0040Q15053 153 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 SLC16A13Q7RTY0 426 aa13.9□□□□□ -0.18
SHROOM4-201ENST00000289292 EDDM3BP56851 147 aa13.89□□□□□ -0.19
SHROOM4-201ENST00000289292 SLC10A1Q14973 349 aa13.89□□□□□ -0.19
SHROOM4-201ENST00000289292 PLAC9Q5JTB6 97 aa13.89□□□□□ -0.19
SHROOM4-201ENST00000289292 BAP18Q8IXM2 172 aa13.89□□□□□ -0.19
SHROOM4-201ENST00000289292 RBMXL3Q8N7X1 1067 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms