RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ATAD3CQ5T2N8 411 aa2.58□□□□□ -2
HERC4-201ENST00000277817 AGAP7PQ5VUJ5 663 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DEGS2Q6QHC5 323 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TSSK4Q6SA08 328 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TMEM205Q6UW68 189 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CCL4L1Q8NHW4 92 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ST7LQ8TDW4 575 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ADAMTS17Q8TE56 1095 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NPRL2Q8WTW4 380 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TMEM171Q8WVE6 324 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PCNPQ8WW12 178 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 OIT3Q8WWZ8 545 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PATE1Q8WXA2 126 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ST8SIA2Q92186 375 aa2.58□□□□□ -2
HERC4-201ENST00000277817 THRSPQ92748 146 aa2.58□□□□□ -2
HERC4-201ENST00000277817 FAM46BQ96A09 425 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MS4A6EQ96DS6 147 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC25A44Q96H78 314 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 TMEM68Q96MH6 324 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MNTQ99583 582 aa2.58□□□□□ -2
HERC4-201ENST00000277817 LPAR4Q99677 370 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RBM24Q9BX46 236 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 SPNS1Q9H2V7 528 aa2.58□□□□□ -2
HERC4-201ENST00000277817 FN3KQ9H479 309 aa2.58□□□□□ -2
HERC4-201ENST00000277817 C8orf33Q9H7E9 229 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 Q9H8V8 135 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NOX3Q9HBY0 568 aa2.58□□□□□ -2
HERC4-201ENST00000277817 FGF22Q9HCT0 170 aa2.58□□□□□ -2
HERC4-201ENST00000277817 Q9N2K0 584 aa2.58□□□□□ -2
HERC4-201ENST00000277817 UBQLN4Q9NRR5 601 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ASB6Q9NWX5 421 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ZNF226Q9NYT6 803 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DIMT1Q9UNQ2 313 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 UGT2A1Q9Y4X1 527 aa2.58□□□□□ -2
HERC4-201ENST00000277817 V9GY05 133 aa2.58□□□□□ -2
HERC4-201ENST00000277817 A0A1B0GWA3 101 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TMEM72A0PK05 275 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SMLR1H3BR10 107 aa2.58□□□□□ -2
HERC4-201ENST00000277817 AP4M1O00189 453 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GOSR2O14653 212 aa2.58□□□□□ -2
HERC4-201ENST00000277817 YY2O15391 372 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MAGEB4O15481 346 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 SYT7O43581 403 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC22A5O76082 557 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC2A10O95528 541 aa2.58□□□□□ -2
HERC4-201ENST00000277817 LGI1O95970 557 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR8G3PP0DMU2 310 aa2.58□□□□□ -2
HERC4-201ENST00000277817 LIPCP11150 499 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SNRPGP62308 76 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 PLGLB1Q02325 96 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SNTA1Q13424 505 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OXA1LQ15070 435 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SF3B4Q15427 424 aaKnown RBP eCLIP2.58□□□□□ -2
HERC4-201ENST00000277817 OR7A5Q15622 319 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DUSP5Q16690 384 aa2.58□□□□□ -2
HERC4-201ENST00000277817 EEF1A1P5Q5VTE0 462 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RAET1LQ5VY80 246 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NXNL2Q5VZ03 156 aa2.58□□□□□ -2
HERC4-201ENST00000277817 B3GNTL1Q67FW5 361 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 MFSD12Q6NUT3 480 aa2.58□□□□□ -2
HERC4-201ENST00000277817 APOOLQ6UXV4 268 aa2.58□□□□□ -2
HERC4-201ENST00000277817 BAIAP2L2Q6UXY1 529 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MOB3CQ70IA8 216 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC35D2Q76EJ3 337 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GDPD3Q7L5L3 318 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CD163Q86VB7 1156 aa2.58□□□□□ -2
HERC4-201ENST00000277817 LRRC28Q86X40 367 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 RNF113BQ8IZP6 322 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 SPAG16Q8N0X2 631 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NANOGP1Q8N7R0 232 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR51Q1Q8NH59 317 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PFN4Q8NHR9 129 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DYNC2LI1Q8TCX1 351 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SGPP1Q9BX95 441 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SIRPDQ9H106 197 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SYT4Q9H2B2 425 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ELOVL3Q9HB03 270 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PARPBPQ9NWS1 579 aa2.58□□□□□ -2
HERC4-201ENST00000277817 C2orf42Q9NWW7 574 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RARRES3Q9UL19 164 aa2.58□□□□□ -2
HERC4-201ENST00000277817 C14orf166Q9Y224 244 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 ZNF337Q9Y3M9 751 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR51B4Q9Y5P0 310 aa2.58□□□□□ -2
HERC4-201ENST00000277817 LRP4O75096 1905 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ZFHX4Q86UP3 3567 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TRAV25A0A0B4J276 109 aa2.58□□□□□ -2
HERC4-201ENST00000277817 A0A0U1RRA0 63 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ZNF705EA8MWA4 302 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 CENPBD1B2RD01 187 aa2.58□□□□□ -2
HERC4-201ENST00000277817 F5H5K5 113 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OGG1O15527 345 aa2.58□□□□□ -2
HERC4-201ENST00000277817 HSPA12AO43301 675 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SPDEFO95238 335 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TGM6O95932 706 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CD160O95971 181 aa2.58□□□□□ -2
HERC4-201ENST00000277817 WNT1P04628 370 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ZNF43P17038 809 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MAOAP21397 527 aa2.58□□□□□ -2
HERC4-201ENST00000277817 HTR1FP30939 366 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PRKAR1BP31321 381 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms