RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 DUX4L7P0CJ90 424 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 MEF2DQ14814 521 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 OR7E24Q6IFN5 339 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 C11orf88Q6PI97 169 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 HSD17B13Q7Z5P4 300 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-201ENST00000277198 SLC38A6Q8IZM9 456 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 C12orf45Q8N5I9 185 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-201ENST00000277198 PLPP7Q8NBV4 271 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 SLC2A8Q9NY64 477 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DUX4Q9UBX2 424 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 FXYD6-FXYD2A0A087WZ82 144 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM200CA6NKL6 621 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 RHPN2P1A8MT19 583 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 A8MXK9 166 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 FTCDNL1E5RQL4 147 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 SCGNO76038 276 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 PLGP00747 810 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 CD8AP01732 235 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 UBCP0CG48 685 aaKnown RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF823P16415 610 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 FBLP22087 321 aaKnown RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 DNASE1L1P49184 302 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 PPM1FP49593 454 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 DAP3P51398 398 aaKnown RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 SUMO3P55854 103 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 MFGE8Q08431 387 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 POMZP3Q6PJE2 187 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF574Q6ZN55 896 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-201ENST00000277198 LYPD6Q86Y78 171 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 SLC26A10Q8NG04 563 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 OR5M9Q8NGP3 310 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 ST8SIA1Q92185 356 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 NRSN2Q9GZP1 204 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 FXYD6Q9H0Q3 95 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 SEMA5BQ9P283 1151 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 GTF2A1LQ9UNN4 478 aa11.53□□□□□ -0.56
C9orf3-201ENST00000277198 A0A0D9SG52 128 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 METTL21EPA6NDL7 271 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF736B4DX44 427 aaPredicted RBP11.52□□□□□ -0.56
C9orf3-201ENST00000277198 ARL4DP49703 201 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 MMP16P51512 607 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 C2orf68Q2NKX9 166 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 SMUG1Q53HV7 270 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 PDZD9Q8IXQ8 264 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 D2HGDHQ8N465 521 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 GALNT11Q8NCW6 608 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 PLPP5Q8NEB5 264 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 MFSD8Q8NHS3 518 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 PCNPQ8WW12 178 aaKnown RBP11.52□□□□□ -0.56
C9orf3-201ENST00000277198 SMG1Q96Q15 3661 aaKnown RBP11.52□□□□□ -0.56
C9orf3-201ENST00000277198 NUDT16L1Q9BRJ7 211 aaKnown RBP11.52□□□□□ -0.56
C9orf3-201ENST00000277198 MFFQ9GZY8 342 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 SLC25A32Q9H2D1 315 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 POFUT1Q9H488 388 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 G6PC2Q9NQR9 355 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 DKK4Q9UBT3 224 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 OR52A1Q9UKL2 312 aa11.52□□□□□ -0.56
C9orf3-201ENST00000277198 MRPS18BQ9Y676 258 aaKnown RBP11.52□□□□□ -0.56
C9orf3-201ENST00000277198 CDC14CA4D256 554 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 SIX6O95475 246 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 FGF2P09038 288 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 FBXO45P0C2W1 286 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 MGMTP16455 207 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 NAGAP17050 411 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 HLA-GP17693 338 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 MPGP29372 298 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 NUP62P37198 522 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-201ENST00000277198 GSK3AP49840 483 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 GPR85P60893 370 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 PMPCAQ10713 525 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF345Q14585 488 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 DCAF12L2Q5VW00 463 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF627Q7L945 461 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 KMT5CQ86Y97 462 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 PLXDC1Q8IUK5 500 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 OR13C3Q8NGS6 347 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 OR8S1Q8NH09 359 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 WDR89Q96FK6 387 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-201ENST00000277198 PRRT1Q99946 306 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 DNTTIP1Q9H147 329 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 FANCFQ9NPI8 374 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 ASCL3Q9NQ33 180 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 PISDQ9UG56 409 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 RAB22AQ9UL26 194 aa11.52□□□□□ -0.57
C9orf3-201ENST00000277198 COA3Q9Y2R0 106 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-201ENST00000277198 IGHV1OR21-1A0A087WYE8 117 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 A0A1B0GTI1 187 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 DISC1C4P0D8 188 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 HOXD4P09016 255 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF735P0CB33 412 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 HSD11B1P28845 292 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
C9orf3-201ENST00000277198 KCNAB1Q14722 419 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 ETFDHQ16134 617 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 SFRP5Q5T4F7 317 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 ZNF660Q6AZW8 331 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-201ENST00000277198 LIN54Q6MZP7 749 aa11.51□□□□□ -0.57
C9orf3-201ENST00000277198 FAHD2BQ6P2I3 314 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms