RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 LTBRP36941 435 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 BTG1P62324 171 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 FAM76BQ5HYJ3 339 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 SLC22A24Q8N4F4 322 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 SCGB3A2Q96PL1 93 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 PRRT1Q99946 306 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 AKIRIN1Q9H9L7 192 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF223Q9UK11 482 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 SF3B6Q9Y3B4 125 aaKnown RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 CHD7Q9P2D1 2997 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 ANKRD34CP0C6C1 535 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 HRH1P35367 487 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 CAPZA1P52907 286 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 TMEM71Q6P5X7 295 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF813Q6ZN06 617 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 PXKQ7Z7A4 578 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 OR2AE1Q8NHA4 323 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 MARCH1Q8TCQ1 289 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 GDF2Q9UK05 429 aaPredicted RBP13.11□□□□□ -0.31
CNOT9-201ENST00000273064 ZMIZ1Q9ULJ6 1067 aa13.11□□□□□ -0.31
CNOT9-201ENST00000273064 MRPL33O75394 65 aaKnown RBP13.1□□□□□ -0.31
CNOT9-201ENST00000273064 B4GALT1P15291 398 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 DUSP1P28562 367 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF121P58317 390 aaPredicted RBP13.1□□□□□ -0.31
CNOT9-201ENST00000273064 MARVELD1Q9BSK0 173 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 GLTPQ9NZD2 209 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF230Q9UIE0 474 aaPredicted RBP13.1□□□□□ -0.31
CNOT9-201ENST00000273064 R4GN57 208 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 SSX5O60225 188 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 PDGFAP04085 211 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 MSX1P28360 303 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 SELENOPP49908 381 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 GK2Q14410 553 aaPredicted RBP13.1□□□□□ -0.31
CNOT9-201ENST00000273064 NLRC3Q7RTR2 1065 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF764Q96H86 408 aaPredicted RBP13.1□□□□□ -0.31
CNOT9-201ENST00000273064 PRDM6Q9NQX0 595 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 SH3BGRL2Q9UJC5 107 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 TNFSF11O14788 317 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 ICMTO60725 284 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF806P0C7X5 589 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 SLC6A1P30531 599 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 CDONQ4KMG0 1287 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 PDSS1Q5T2R2 415 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
CNOT9-201ENST00000273064 LRRTM1Q86UE6 522 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF454Q8N9F8 522 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 UBALD1Q8TB05 177 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 PBOV1Q9GZY1 135 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
CNOT9-201ENST00000273064 H7C417 338 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 ACHEP22303 614 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 S100A11P31949 105 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 APOBEC1P41238 236 aaKnown RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 MFGE8Q08431 387 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 FUT7Q11130 342 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 SKP2Q13309 424 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 CREB3L2Q70SY1 520 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 ADGRG3Q86Y34 549 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 VOPP1Q96AW1 172 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 LIN37Q96GY3 246 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 CMSS1Q9BQ75 279 aaKnown RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 MRI1Q9BV20 369 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 MBD2Q9UBB5 411 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 FBXO9Q9UK97 447 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 TRAV1-2A0A0B4J238 106 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 MMP15P51511 669 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 LSMEM1Q8N8F7 131 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 OR1M1Q8NGA1 313 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 OR52N4Q8NGI2 321 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 MAFAQ8NHW3 353 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 FOXRED1Q96CU9 486 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 MVB12AQ96EY5 273 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 GSX2Q9BZM3 304 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 EIF5A2Q9GZV4 153 aaKnown RBP13.09□□□□□ -0.31
CNOT9-201ENST00000273064 PPA2Q9H2U2 334 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 ALG1L2C9J202 215 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 DDAH2O95865 285 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 ZNF44P15621 663 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 AGTR1P30556 359 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 SULF2Q8IWU5 870 aa13.09□□□□□ -0.31
CNOT9-201ENST00000273064 RAF1P04049 648 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 LTC4SQ16873 150 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 DCAF12Q5T6F0 453 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 PXDC1Q5TGL8 231 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 KLHDC3Q9BQ90 382 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 S1PR5Q9H228 398 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 PLXND1Q9Y4D7 1925 aa13.08□□□□□ -0.31
CNOT9-201ENST00000273064 ALX3O95076 343 aa13.08□□□□□ -0.32
CNOT9-201ENST00000273064 UBCP0CG48 685 aaKnown RBP13.08□□□□□ -0.32
CNOT9-201ENST00000273064 SLC35A1P78382 337 aa13.08□□□□□ -0.32
CNOT9-201ENST00000273064 WIPI1Q5MNZ9 446 aaPredicted RBP13.08□□□□□ -0.32
CNOT9-201ENST00000273064 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
CNOT9-201ENST00000273064 SLC25A45Q8N413 288 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms