RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TRAV17A0A0B4J275 112 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 IGLV3-1P01715 115 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 CST2P09228 141 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ZNF24P17028 368 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 KRTAP27-1Q3LI81 207 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 PYDC2Q56P42 97 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 FAM166AQ6J272 317 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ZNF544Q6NX49 715 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 LYPD6Q86Y78 171 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 SIAH3Q8IW03 269 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 GJC3Q8NFK1 279 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 OR1J2Q8NGS2 313 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 OR51E1Q8TCB6 317 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ITFG2Q969R8 447 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 FOXB1Q99853 325 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 LINC00470Q9BZP3 86 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 FAIMQ9NVQ4 179 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 PAQR5Q9NXK6 330 aaPredicted RBP10.63□□□□□ -0.71
SDE2-201ENST00000272091 FREM1Q5H8C1 2179 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 BOLA2-SMG1P6H3BVE0 249 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 TFECO14948 347 aaPredicted RBP10.63□□□□□ -0.71
SDE2-201ENST00000272091 DBHP09172 617 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 OCMP0CE72 109 aaPredicted RBP10.63□□□□□ -0.71
SDE2-201ENST00000272091 CRYGSP22914 178 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 GRB2P62993 217 aaKnown RBP10.63□□□□□ -0.71
SDE2-201ENST00000272091 IL18Q14116 193 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ELFN2Q5R3F8 820 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 TMEM244Q5VVB8 128 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 IGFL3Q6UXB1 125 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ADGRE4PQ86SQ3 457 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ADAT3Q96EY9 351 aaPredicted RBP10.63□□□□□ -0.71
SDE2-201ENST00000272091 LYZL4Q96KX0 146 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 NIPAL2Q9H841 368 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 FOXJ3Q9UPW0 622 aa10.63□□□□□ -0.71
SDE2-201ENST00000272091 ARPC4-TTLL3A0A0A6YYG9 625 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 SYNGR3O43761 229 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 HLA-DQB1P01920 261 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 PTBP1P26599 531 aaKnown RBP eCLIP10.62□□□□□ -0.71
SDE2-201ENST00000272091 GDPD3Q7L5L3 318 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 SKA3Q8IX90 412 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 PRDM14Q9GZV8 571 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
SDE2-201ENST00000272091 CAMK2AQ9UQM7 478 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 MRPL33O75394 65 aaKnown RBP10.62□□□□□ -0.71
SDE2-201ENST00000272091 ITGA5P08648 1049 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 GALK2Q01415 458 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 TRIM16LQ309B1 348 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 BIVMQ86UB2 503 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 CMTM4Q8IZR5 234 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 SLC22A24Q8N4F4 322 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 POC5Q8NA72 575 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 ABHD1Q96SE0 405 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 KCNK15Q9H427 330 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 EXO5Q9H790 373 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 MOB1AQ9H8S9 216 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 TTLL8A6PVC2 850 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 CCL1P22362 96 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 RFX2P48378 723 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 TAF13Q15543 124 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 SLC25A28Q96A46 364 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 SLITRK2Q9H156 845 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 SLC17A5Q9NRA2 495 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 ADAM30Q9UKF2 790 aa10.62□□□□□ -0.71
SDE2-201ENST00000272091 RPL36A-HNRNPH2H7BZ11 118 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 LANCL1O43813 399 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 APOA1P02647 267 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 YES1P07947 543 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 MMP7P09237 267 aaPredicted RBP10.61□□□□□ -0.71
SDE2-201ENST00000272091 UBE2NLQ5JXB2 153 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 ZNF774Q6NX45 483 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 PLPP7Q8NBV4 271 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 EMC3Q9P0I2 261 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 ZNF503-AS2A6NEH8 195 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 PLA2G10O15496 165 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 ZNF32P17041 273 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 GUCA1AP43080 201 aaPredicted RBP10.61□□□□□ -0.71
SDE2-201ENST00000272091 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
SDE2-201ENST00000272091 ZNF529Q6P280 563 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 ZNF283Q8N7M2 679 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 SNIP1Q8TAD8 396 aaKnown RBP10.61□□□□□ -0.71
SDE2-201ENST00000272091 THRSPQ92748 146 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 FGGYQ96C11 551 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 WNT5BQ9H1J7 359 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 RHBDL2Q9NX52 303 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 CLCF1Q9UBD9 225 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 OR6C6A6NF89 314 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 ANXA2P2A6NMY6 339 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 ANXA2P07355 339 aaKnown RBP10.61□□□□□ -0.71
SDE2-201ENST00000272091 RAB35Q15286 201 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 TAB1Q15750 504 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 SFRP5Q5T4F7 317 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 Q8N402 240 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 MINDY2Q8NBR6 621 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 SP140LQ9H930 580 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 N6AMT1Q9Y5N5 214 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 MED12LQ86YW9 2145 aa10.61□□□□□ -0.71
SDE2-201ENST00000272091 CALCBP10092 127 aa10.6□□□□□ -0.71
SDE2-201ENST00000272091 AGTR1P30556 359 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms