RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 A0A1W2PR64 198 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 A0A1W2PRV1 198 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 SPINT2O43291 252 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 WISP3O95389 354 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 SRD5A2P31213 254 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 LTBRP36941 435 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 FABP5Q01469 135 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 DOC2BQ14184 412 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 TOMM34Q15785 309 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 KANSL1Q7Z3B3 1105 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 OR51A2Q8NGJ7 313 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 DEDD2Q8WXF8 326 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 EP300Q09472 2414 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 TDRD6O60522 2096 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 IFNA1P01562 189 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 FUCA1P04066 466 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 RAD52P43351 418 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 SPATA46Q5T0L3 261 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 SNX18Q96RF0 628 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 PSD2Q9BQI7 771 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 ZNF732B4DXR9 585 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 C21orf140B9A014 251 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 BHLHE40O14503 412 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 CNR1P21554 472 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 RAB1AP62820 205 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 RAC1P63000 192 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 ARF1P84077 181 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 CD226Q15762 336 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 TMEM52Q8NDY8 209 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 PTPMT1Q8WUK0 201 aaPredicted RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 CCDC86Q9H6F5 360 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 RBFOX1Q9NWB1 397 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 ZNF705EA8MWA4 302 aaPredicted RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 TGFBR1P36897 503 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 SLC37A1P57057 533 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 C12orf73Q69YU5 71 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 RDH5Q92781 318 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 EXO1Q9UQ84 846 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 TOR1AO14656 332 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 GSTP1P09211 210 aaKnown RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
NPC1-201ENST00000269228 OR56B2PQ8NGI1 322 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 SGK3Q96BR1 496 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 ITPKCQ96DU7 683 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 OR2M2Q96R28 347 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 SIAEQ9HAT2 523 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 GFOD1Q9NXC2 390 aa12.34□□□□□ -0.43
NPC1-201ENST00000269228 TRABD2BA6NFA1 517 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 H7C1Q1 480 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 HTR2AP28223 471 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 SOX8P57073 446 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 RPP30P78346 268 aaKnown RBP12.33□□□□□ -0.44
NPC1-201ENST00000269228 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
NPC1-201ENST00000269228 ARPC4-TTLL3A0A0A6YYG9 625 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 A0A1W2PR80 420 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 ELK1P19419 428 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.44
NPC1-201ENST00000269228 BMP5P22003 454 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 CHRNB4P30926 498 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 BDH1Q02338 343 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 AQP6Q13520 282 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 PDZD9Q8IXQ8 264 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 HRASLSQ9HDD0 168 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 TCRBV16S1A1N1A0A5B0 115 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 PNLIPP16233 465 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 CCR6P51684 374 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 LGALS4P56470 323 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 RNPS1Q15287 305 aaKnown RBP12.33□□□□□ -0.44
NPC1-201ENST00000269228 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 OTOSQ8NHW6 89 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 ZNF501Q96CX3 271 aaPredicted RBP12.33□□□□□ -0.44
NPC1-201ENST00000269228 DNAJC13O75165 2243 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 CRYZL1O95825 349 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 RPA2P15927 270 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 TGM4P49221 684 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 NPY4RP50391 375 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 FUT7Q11130 342 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 MOGAT1Q96PD6 335 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 RP1P56715 2156 aa12.33□□□□□ -0.44
NPC1-201ENST00000269228 HSPB2A8KAH6 182 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 SP9P0CG40 484 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 GLRA1P23415 457 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 F2RL1P55085 397 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 OR10A3P58181 314 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 ZNF169Q14929 603 aaPredicted RBP12.32□□□□□ -0.44
NPC1-201ENST00000269228 HSPB2Q16082 182 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 ZAR1Q86SH2 424 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 OR1J1Q8NGS3 322 aa12.32□□□□□ -0.44
NPC1-201ENST00000269228 APOBEC4Q8WW27 367 aaKnown RBP12.32□□□□□ -0.44
NPC1-201ENST00000269228 C11orf54Q9H0W9 315 aaPredicted RBP12.32□□□□□ -0.44
NPC1-201ENST00000269228 PILRBQ9UKJ0 227 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms