RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 CX3CR1P49238 355 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 TDGF1P3P51864 188 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 KRTAP27-1Q3LI81 207 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 CEP78Q5JTW2 689 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 TFAP2EQ6VUC0 442 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 Q6ZNX1 250 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 PRSS45Q7RTY3 260 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 ZNF283Q8N7M2 679 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 OR1F12Q8NHA8 337 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 ASB5Q8WWX0 329 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 ZCCHC14Q8WYQ9 949 aaKnown RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 SPTSSAQ969W0 71 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 TMEM106AQ96A25 262 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 OR2H1Q9GZK4 316 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 HMG20AQ9NP66 347 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 DSPP15924 2871 aaKnown RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 LOC107986453A0A1B0GWG9 222 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 SMIM30A4D0T7 59 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 CTDSP2O14595 271 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ACSM4P0C7M7 580 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 BMP4P12644 408 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 KIR2DL2P43627 348 aaPredicted RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 SOX2P48431 317 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 FOXG1P55316 489 aaPredicted RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 PSG4Q00888 419 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 GALK2Q01415 458 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 SLC36A2Q495M3 483 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 GCNT2Q8N0V5 402 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 MFSD4AQ8N468 514 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 CISD2Q8N5K1 135 aaKnown RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 OR6K3Q8NGY3 331 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 TSEN15Q8WW01 171 aaKnown RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 ACOT12Q8WYK0 555 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 SLITRK2Q9H156 845 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 WNT5BQ9H1J7 359 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 BRD7Q9NPI1 651 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 SLC17A5Q9NRA2 495 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ETAA1Q9NY74 926 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ATPIF1Q9UII2 106 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 DHDHQ9UQ10 334 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 FIGNL2A6NMB9 653 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 NOTOA8MTQ0 251 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 PDCD5O14737 125 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 DOK2O60496 412 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 IL18BPO95998 194 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 CD2P06729 351 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 CRHP06850 196 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ZNF12P17014 697 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ETV6P41212 452 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ZNF774Q6NX45 483 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 SFXN4Q6P4A7 337 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ANKRD16Q6P6B7 361 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 DPPA2Q7Z7J5 298 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 FAM57AQ8TBR7 257 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 SLX1AQ9BQ83 275 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 ZNF224Q9NZL3 707 aa12.34□□□□□ -0.43
SS18-201ENST00000269137 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
SS18-201ENST00000269137 hCG_2014768A0A024R1R8 64 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 A0A1B0GTI1 187 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 ANKRD61A6NGH8 418 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 F5H5K5 113 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 M0R135 149 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 P2RY10O00398 339 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 TMEM127O75204 238 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 TPOP07202 933 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 ITGA5P08648 1049 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 PATE4P0C8F1 98 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 OR10A3P58181 314 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 EIF2S3LQ2VIR3 472 aaKnown RBP12.33□□□□□ -0.44
SS18-201ENST00000269137 C1orf185Q5T7R7 199 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 C9orf135Q5VTT2 229 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 RTL6Q6ICC9 239 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 DRAM2Q6UX65 266 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 STAC2Q6ZMT1 411 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 SEM1Q6ZVN7 128 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 OR8B12Q8NGG6 310 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 BCL2L2Q92843 193 aaPredicted RBP12.33□□□□□ -0.44
SS18-201ENST00000269137 ORAI1Q96D31 301 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 WDFY2Q96P53 400 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 TCF7L1Q9HCS4 588 aa12.33□□□□□ -0.44
SS18-201ENST00000269137 A0A0U1RQV5 110 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 ANXA2P07355 339 aaKnown RBP12.32□□□□□ -0.44
SS18-201ENST00000269137 SLC2A1P11166 492 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 EPXP11678 715 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 CCL1P22362 96 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 APEX1P27695 318 aaKnown RBP12.32□□□□□ -0.44
SS18-201ENST00000269137 TPTEP56180 551 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 DDI2Q5TDH0 399 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 MZT2AQ6P582 158 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 Q6ZT83 130 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 FAM57BQ71RH2 274 aa12.32□□□□□ -0.44
SS18-201ENST00000269137 CCDC190Q86UF4 302 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms