RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PLPP3O14495 311 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 ZNF217O75362 1048 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 ZNF432O94892 652 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 CNR1P21554 472 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 SERPINF1P36955 418 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 AKR1C3P42330 323 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 PLEKHN1Q494U1 663 aaPredicted RBP14.99□□□□□ -0.01
SQLE-201ENST00000265896 AWAT2Q6E213 333 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 FAM166AQ6J272 317 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 CLEC9AQ6UXN8 241 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 ANGPTL5Q86XS5 388 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 OR10R2Q8NGX6 335 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 C15orf40Q8WUR7 153 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 MRI1Q9BV20 369 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 RASL12Q9NYN1 266 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 SUSD2Q9UGT4 822 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 GPN3Q9UHW5 284 aaPredicted RBP14.99□□□□□ -0.01
SQLE-201ENST00000265896 CSAG2Q9Y5P2 127 aa14.99□□□□□ -0.01
SQLE-201ENST00000265896 NPIPA5E9PKD4 350 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 IFNA6P05013 189 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 FOLR1P15328 257 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 CASRP41180 1078 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 SERTAD2Q14140 314 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 TEX30Q5JUR7 227 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 ZNF519Q8TB69 540 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 ZNF416Q9BWM5 594 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 TXNIPQ9H3M7 391 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 G6PC2Q9NQR9 355 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 VSX1Q9NZR4 365 aaPredicted RBP14.98□□□□□ -0.01
SQLE-201ENST00000265896 UPB1Q9UBR1 384 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 NPIPA1Q9UND3 350 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 MSGN1A6NI15 193 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 SOCS1O15524 211 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 MGMTP16455 207 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 ID4P47928 161 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 SGCBQ16585 318 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 NAXDQ8IW45 347 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 RRNAD1Q96FB5 475 aaKnown RBP14.98□□□□□ -0.01
SQLE-201ENST00000265896 SLC46A1Q96NT5 459 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 NKX6-2Q9C056 277 aaPredicted RBP14.98□□□□□ -0.01
SQLE-201ENST00000265896 LAT2Q9GZY6 243 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 TNFSF18Q9UNG2 199 aa14.98□□□□□ -0.01
SQLE-201ENST00000265896 A0A1W2PNR3 127 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 C9orf170A2RU37 121 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 OR5K4A6NMS3 321 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 SYT7O43581 403 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 EIF4E2O60573 245 aaKnown RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 FARS2O95363 451 aaKnown RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 POU2F2P09086 479 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 VSIG8P0DPA2 414 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 PGCP20142 388 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 BIDP55957 195 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 PPIAP62937 165 aaKnown RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 SNTB1Q13884 538 aaKnown RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 FBXO46Q6PJ61 603 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 IQCF2Q8IXL9 164 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 AIFM2Q9BRQ8 373 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ST6GALNAC5Q9BVH7 336 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ZNF705EA8MWA4 302 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 HSD17B13Q7Z5P4 300 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 PUSL1Q8N0Z8 303 aaKnown RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 ESX1Q8N693 406 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 TMEM229BQ8NBD8 167 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 INO80EQ8NBZ0 244 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 OR1L3Q8NH93 324 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 THAP6Q8TBB0 222 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 WWTR1Q9GZV5 400 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 HRH4Q9H3N8 390 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 BARX1Q9HBU1 254 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 PCDHB16Q9NRJ7 776 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 MED19A0JLT2 244 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 OR14I1A6ND48 311 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ABCD4O14678 606 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ZNF208O43345 1280 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 OR2T1O43869 369 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ACTL6AO96019 429 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 NFYBP25208 207 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 TLE3Q04726 772 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 TDGQ13569 410 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 EMC4Q5J8M3 183 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 KIAA0895LQ68EN5 471 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 NAA40Q86UY6 237 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ZNF775Q96BV0 537 aaPredicted RBP14.97□□□□□ -0.01
SQLE-201ENST00000265896 ACKR4Q9NPB9 350 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 R4GMQ9 66 aa14.97□□□□□ -0.01
SQLE-201ENST00000265896 ATG12O94817 140 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 IGKV3-11P04433 115 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 ADCYAP1P18509 176 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 OR3A4PP47883 348 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 PDSS1Q5T2R2 415 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 ZNF248Q8NDW4 579 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 OR51F2Q8NH61 342 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 TREM1Q9NP99 234 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 DZANK1Q9NVP4 752 aa14.96□□□□□ -0.01
SQLE-201ENST00000265896 MS4A18H0YCH9 400 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 SFTPDP35247 375 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 STK11Q15831 433 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 MS4A18Q3C1V0 323 aa14.96□□□□□ -0.02
SQLE-201ENST00000265896 ABHD12BQ7Z5M8 362 aaPredicted RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms