RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 NMNAT3Q96T66 252 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 IL1RAPQ9NPH3 570 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 MAGEL2Q9UJ55 1249 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 PCDHB10Q9UN67 800 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 LHFPL6Q9Y693 200 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 V9GYQ6 96 aa8.2□□□□□ -1.1
VPS41-201ENST00000265745 SURF4O15260 269 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 IDH3BO43837 385 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 GADD45GO95257 159 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 PPP1R3DO95685 299 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 HIST1H1CP16403 213 aaKnown RBP8.19□□□□□ -1.1
VPS41-201ENST00000265745 ADRA2CP18825 462 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 SLC6A6P31641 620 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 CENPAP49450 140 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 HILS1P60008 231 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 LCN2P80188 198 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 SPIBQ01892 262 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 DBPQ10586 325 aaPredicted RBP8.19□□□□□ -1.1
VPS41-201ENST00000265745 COX10Q12887 443 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 KRTAP27-1Q3LI81 207 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 TMEM155Q4W5P6 130 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 LEG1Q6P5S2 330 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 PGM2L1Q6PCE3 622 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 DNM1P34Q6PK57 102 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 CORO6Q6QEF8 472 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 COLCA1Q6ZS62 124 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 CPLX4Q7Z7G2 160 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.19□□□□□ -1.1
VPS41-201ENST00000265745 ZBTB46Q86UZ6 589 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 OR5AS1Q8N127 324 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 SLC26A10Q8NG04 563 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 OR4K13Q8NH42 304 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 NANPQ8TBE9 248 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 ST7LQ8TDW4 575 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 ITLN1Q8WWA0 313 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 APOBEC3DQ96AK3 386 aaPredicted RBP8.19□□□□□ -1.1
VPS41-201ENST00000265745 MCUR1Q96AQ8 359 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 OR2V2Q96R30 315 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 SIGLEC11Q96RL6 698 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 COQ7Q99807 217 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 OR52D1Q9H346 318 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 MMP26Q9NRE1 261 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 ARL8BQ9NVJ2 186 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 PPP1R3CQ9UQK1 317 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 POLR1DQ9Y2S0 133 aa8.19□□□□□ -1.1
VPS41-201ENST00000265745 OR6C68A6NDL8 312 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 TMEM178BH3BS89 294 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 ARPC2O15144 300 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 OR10H3O60404 316 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 FOXH1O75593 365 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 FSHBP01225 129 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 FABP3P05413 133 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 NOS3P29474 1203 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 IFNGR2P38484 337 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 SLC6A9P48067 706 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 GSSP48637 474 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 HMGA2P52926 109 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 BTG1P62324 171 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 ZMYND11Q15326 602 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 SPATS1Q496A3 300 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 OR2T2Q6IF00 324 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 SLC18B1Q6NT16 456 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 SLC27A4Q6P1M0 643 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 PIGWQ7Z7B1 504 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 KLHL36Q8N4N3 616 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 SPICQ8N5J4 248 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 ATG16L2Q8NAA4 619 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 OR8G5Q8NG78 346 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 OR13G1Q8NGZ3 307 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 FANK1Q8TC84 345 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 FAM216AQ8WUB2 273 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 NSMCE2Q96MF7 247 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 ZNF582Q96NG8 517 aaPredicted RBP8.18□□□□□ -1.1
VPS41-201ENST00000265745 DDOQ99489 341 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 IFT27Q9BW83 186 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 C1QTNF5Q9BXJ0 243 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 NSRP1Q9H0G5 558 aaKnown RBP8.18□□□□□ -1.1
VPS41-201ENST00000265745 PATZ1Q9HBE1 687 aaKnown RBP8.18□□□□□ -1.1
VPS41-201ENST00000265745 GCM1Q9NP62 436 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 RPRD1BQ9NQG5 326 aaKnown RBP8.18□□□□□ -1.1
VPS41-201ENST00000265745 PTTG3PQ9NZH4 202 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 CYB5R1Q9UHQ9 305 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 TAGLN3Q9UI15 199 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 TMCC3Q9ULS5 477 aa8.18□□□□□ -1.1
VPS41-201ENST00000265745 A0A1B0GWJ7 208 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 IQCF6A8MYZ5 107 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 F5H0A9 414 aaPredicted RBP8.17□□□□□ -1.1
VPS41-201ENST00000265745 H0YL77 283 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 IFNL4K9M1U5 179 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 KRT36O76013 467 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 RENP00797 406 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 ACSM4P0C7M7 580 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 RRM2P31350 389 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 GGT2P36268 569 aa8.17□□□□□ -1.1
VPS41-201ENST00000265745 MDH2P40926 338 aaKnown RBP8.17□□□□□ -1.1
VPS41-201ENST00000265745 COMPP49747 757 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms