RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-201ENST00000265304 MYCBPQ99417 103 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-201ENST00000265304 ERVK13-1Q9NX77 482 aa12.32□□□□□ -0.44
SSBP1-201ENST00000265304 USF3Q68DE3 2245 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 C5orf49A4QMS7 147 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 XPNPEP2O43895 674 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 FAM20BO75063 409 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 ATP6V1E1P36543 226 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 RAD52P43351 418 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 TPTEP56180 551 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 ST3GAL4Q11206 333 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 MED21Q13503 144 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 ARL9Q6T311 187 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 PLEKHG7Q6ZR37 379 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 SSX6Q7RTT6 188 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 TMEM171Q8WVE6 324 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 IGFBPL1Q8WX77 278 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 TMEM80Q96HE8 168 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 C4orf45Q96LM5 186 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 CNBD2Q96M20 576 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 COG8Q96MW5 612 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 CDCA4Q9BXL8 241 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 MROQ9BYG7 248 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 BCL2L14Q9BZR8 327 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 ELOVL3Q9HB03 270 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 SLCO1C1Q9NYB5 712 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
SSBP1-201ENST00000265304 TPRKBQ9Y3C4 175 aa12.31□□□□□ -0.44
SSBP1-201ENST00000265304 SETXQ7Z333 2677 aaKnown RBP12.31□□□□□ -0.44
SSBP1-201ENST00000265304 METTL15A6NJ78 407 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 M0R135 149 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 MRPS14O60783 128 aaKnown RBP12.3□□□□□ -0.44
SSBP1-201ENST00000265304 PLAUP00749 431 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 CDK1P06493 297 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 DBHP09172 617 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF250P15622 560 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 EVX1P49640 407 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 SPOCK1Q08629 439 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 IRF3Q14653 427 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF672Q499Z4 452 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF704Q6ZNC4 412 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF101Q8IZC7 436 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 BPIFB6Q8NFQ5 453 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 OR10H4Q8NGA5 316 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 HAVCR2Q8TDQ0 301 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 SLC7A6Q92536 515 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 APOBEC3DQ96AK3 386 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-201ENST00000265304 PIK3IP1Q96FE7 263 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF799Q96GE5 643 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 RHNO1Q9BSD3 238 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 PAK1IP1Q9NWT1 392 aaPredicted RBP12.3□□□□□ -0.44
SSBP1-201ENST00000265304 SCN3BQ9NY72 215 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 SPEF1Q9Y4P9 236 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 LRP12Q9Y561 859 aa12.3□□□□□ -0.44
SSBP1-201ENST00000265304 E7EQL1 145 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 SMPD2O60906 423 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 APOL3O95236 402 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 NGFP01138 241 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 H2BFMP0C1H6 154 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 CCL2P13500 99 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 PSMA6P60900 246 aaKnown RBP12.29□□□□□ -0.44
SSBP1-201ENST00000265304 MVKQ03426 396 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 KRT80Q6KB66 452 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 TMEM154Q6P9G4 183 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 SLC22A25Q6T423 547 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 LRRN1Q6UXK5 716 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 Q6ZSR3 168 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 KRT74Q7RTS7 529 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 KRT77Q7Z794 578 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF611Q8N823 705 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 OR52H1Q8NGJ2 320 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 SPSB4Q96A44 273 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 MARS2Q96GW9 593 aaKnown RBP12.29□□□□□ -0.44
SSBP1-201ENST00000265304 DOK1Q99704 481 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 COPS4Q9BT78 406 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 SP140LQ9H930 580 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 CENPMQ9NSP4 180 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 FAM206AQ9NX38 181 aa12.29□□□□□ -0.44
SSBP1-201ENST00000265304 EIF3KQ9UBQ5 218 aaKnown RBP12.29□□□□□ -0.44
SSBP1-201ENST00000265304 CAB39Q9Y376 341 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-201ENST00000265304 EXOSC1Q9Y3B2 195 aaKnown RBP12.29□□□□□ -0.44
SSBP1-201ENST00000265304 CCDC168Q8NDH2 2452 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 PDZD2O15018 2839 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 IGLV3-9A0A075B6K5 115 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 TMEM129A0AVI4 362 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 DAPL1A0PJW8 107 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 HS3ST1O14792 307 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 IGLV3-1P01715 115 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 TACSTD2P09758 323 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 DANCRP0C864 163 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 C21orf33P30042 268 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-201ENST00000265304 RIDAP52758 137 aaKnown RBP12.28□□□□□ -0.44
SSBP1-201ENST00000265304 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms