RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 OR51E2Q9H255 320 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 G6PC2Q9NQR9 355 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 DDX28Q9NUL7 540 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 FAM206AQ9NX38 181 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 COQ3Q9NZJ6 369 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF319Q9P2F9 582 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 CADP27708 2225 aa8.47□□□□□ -1.05
SNRNP40-201ENST00000263694 FLNCQ14315 2725 aa8.46□□□□□ -1.05
SNRNP40-201ENST00000263694 OR5H1A6NKK0 313 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CCRL2O00421 344 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF254O75437 659 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 UBL3O95164 117 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 PSMB1P20618 241 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CRYGSP22914 178 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 HOXC12P31275 282 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 UGT2B10P36537 528 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 TGFBR1P36897 503 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 SLC6A9P48067 706 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CX3CR1P49238 355 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 GDI2P50395 445 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 IDH3GP51553 393 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 LSM3P62310 102 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 ALKBH1Q13686 389 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CDK5R1Q15078 307 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 FOXB2Q5VYV0 432 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 DMKNQ6E0U4 476 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 DEGS2Q6QHC5 323 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 FAM57BQ71RH2 274 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CATSPERDQ86XM0 798 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CLVS1Q8IUQ0 354 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 PAQR4Q8N4S7 273 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 C1orf162Q8NEQ5 155 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 IL17RDQ8NFM7 739 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 OR10AC1Q8NH08 325 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 LILRB4Q8NHJ6 448 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 GHSRQ92847 366 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 UFD1Q92890 307 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 ZC3HAV1LQ96H79 300 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 C4orf45Q96LM5 186 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 KCNJ15Q99712 375 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 HDHD2Q9H0R4 259 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 RNF167Q9H6Y7 350 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 ISYNA1Q9NPH2 558 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 SF3B6Q9Y3B4 125 aaKnown RBP8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 SLC25A15Q9Y619 301 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 CEPT1Q9Y6K0 416 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 R4GMQ9 66 aa8.46□□□□□ -1.06
SNRNP40-201ENST00000263694 MYO18BQ8IUG5 2567 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ARPC4-TTLL3A0A0A6YYG9 625 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 C5orf49A4QMS7 147 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 A6NHS1 94 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 OR4C45A6NMZ5 311 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 LOC110117498-PIK3R3F6TDL0 507 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 C16orf97H3BN30 126 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 M0R135 149 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 PLPP2O43688 288 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ZFPL1O95159 310 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ANXA2P07355 339 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ACSM4P0C7M7 580 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF14P17017 642 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 STOMP27105 288 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 TGM4P49221 684 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ASCL1P50553 236 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF83P51522 516 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 PRSS12P56730 875 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 GRB2P62993 217 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 BDH1Q02338 343 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 PLP2Q04941 152 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 TAB1Q15750 504 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 KRTAP27-1Q3LI81 207 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 RPL22L1Q6P5R6 122 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 SLC16A12Q6ZSM3 486 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ALDH16A1Q8IZ83 802 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 CA5BP1Q8WTZ4 195 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 NANOS1Q8WY41 292 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 RGP1Q92546 391 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ZNF799Q96GE5 643 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 BOD1Q96IK1 185 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 PGLYRP3Q96LB9 341 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 DOK1Q99704 481 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 COQ7Q99807 217 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 SOX7Q9BT81 388 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 PBOV1Q9GZY1 135 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 OR51B6Q9H340 312 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 NDUFB11Q9NX14 153 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 ELOVL5Q9NYP7 299 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 NPAP1Q9NZP6 1156 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 OR52A1Q9UKL2 312 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 HCFC1P51610 2035 aa8.45□□□□□ -1.06
SNRNP40-201ENST00000263694 LOC100506127A0A0U1RQW1 187 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 IQCMA0A1B0GVH7 501 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 A0A1W2PPK0 400 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CCDC160A6NGH7 325 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 P2RY10O00398 339 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 TBX1O43435 398 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 GPX5O75715 221 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 SERPINA5P05154 406 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 THBDP07204 575 aa8.44□□□□□ -1.06
SNRNP40-201ENST00000263694 CBR1P16152 277 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms