RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 F10P00742 488 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 SSX2Q16385 188 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 CPEB2Q7Z5Q1 589 aaKnown RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 HEYLQ9NQ87 328 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 TIMM10BQ9Y5J6 103 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 FLVCR1Q9Y5Y0 555 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 GLSO94925 669 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 NKX2-2O95096 273 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 LIMS3P0CW19 117 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 LIMS4P0CW20 117 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ADRA2CP18825 462 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 TBXA2RP21731 343 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 THBS3P49746 956 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 RAB11AP62491 216 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 LILRA6Q6PI73 481 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ZNF793Q6ZN11 406 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 SLC16A12Q6ZSM3 486 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 BAP18Q8IXM2 172 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 OXGR1Q96P68 337 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 NGBQ9NPG2 151 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 SLCO1C1Q9NYB5 712 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ING1Q9UK53 422 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 PCDHB10Q9UN67 800 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 SLCO1B1Q9Y6L6 691 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 TUBAL3A6NHL2 446 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ZNF732B4DXR9 585 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 SDCBPO00560 298 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 SPINT2O43291 252 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 PRKNO60260 465 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 MT-ND4LP03901 98 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ADRB1P08588 477 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 GSTP1P09211 210 aaKnown RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 TAGLN2P37802 199 aaKnown RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 GFERP55789 205 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ZNF628Q5EBL2 1059 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 KMT5CQ86Y97 462 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 BHLHE23Q8NDY6 225 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 OR4C16Q8NGL9 310 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 OR51F2Q8NH61 342 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ORAI1Q96D31 301 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 PBX4Q9BYU1 374 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 HIPK2Q9H2X6 1198 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 GFOD1Q9NXC2 390 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 DEGS1O15121 323 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ARPC3O15145 178 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 IGHA2P01877 340 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 GLI4P10075 376 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 CRYBB2P43320 205 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 METAP1P53582 386 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 PDZK1IP1Q13113 114 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 BATFQ16520 125 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ADAM5Q6NVV9 412 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 VHLLQ6RSH7 139 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 MFSD4AQ8N468 514 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 OR10Z1Q8NGY1 313 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 OR10J5Q8NHC4 309 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 ST8SIA4Q92187 359 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 TTC9Q92623 222 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 INTS12Q96CB8 462 aaKnown RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 PHF7Q9BWX1 381 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 NKX6-2Q9C056 277 aaPredicted RBP9.75□□□□□ -0.85
CD44-201ENST00000263398 DUSP13Q9UII6 198 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 A0A0B4J2E0 115 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 A0A1B0GX12 115 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 HLA-HP01893 362 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 SPNP16150 400 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 SHBQ15464 509 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 TESK1Q15569 626 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 CD300LDQ6UXZ3 194 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 YRDCQ86U90 279 aaKnown RBP9.74□□□□□ -0.85
CD44-201ENST00000263398 CDH26Q8IXH8 852 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 ZNF808Q8N4W9 903 aaPredicted RBP9.74□□□□□ -0.85
CD44-201ENST00000263398 EXD3Q8N9H8 876 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 OR51H1Q8NH63 302 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 PBOV1Q9GZY1 135 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 ERVMER34-1Q9H9K5 563 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 GHRLQ9UBU3 117 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 LILRA5A6NI73 299 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 PPP1R2P9O14990 202 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 IGHV3-9P01782 118 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 MGMTP16455 207 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 PSMB3P49720 205 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
CD44-201ENST00000263398 PCBP4P57723 403 aaKnown RBP9.74□□□□□ -0.85
CD44-201ENST00000263398 DEFA6Q01524 100 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 GPNMBQ14956 572 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 TOMM34Q15785 309 aaPredicted RBP9.74□□□□□ -0.85
CD44-201ENST00000263398 TBC1D28Q2M2D7 210 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 TMEM41BQ5BJD5 291 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 TOR2AQ5JU69 321 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 OR8B4Q96RC9 309 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 PLSCR3Q9NRY6 295 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 FBXL4Q9UKA2 621 aa9.74□□□□□ -0.85
CD44-201ENST00000263398 KIAA1217Q5T5P2 1943 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms