RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 UBAP1Q9NZ09 502 aa14.34□□□□□ -0.11
CHCHD3-201ENST00000262570 CISD1Q9NZ45 108 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-201ENST00000262570 CNOT2Q9NZN8 540 aaKnown RBP14.34□□□□□ -0.11
CHCHD3-201ENST00000262570 LRP12Q9Y561 859 aa14.34□□□□□ -0.11
CHCHD3-201ENST00000262570 FLNBO75369 2602 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 LRBAP50851 2863 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 DAPL1A0PJW8 107 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 IRGMA1A4Y4 181 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 EFCAB10A6NFE3 127 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 SLC1A7O00341 560 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 MAGEB4O15481 346 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 SMPD2O60906 423 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 FAM20BO75063 409 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 DCKP27707 260 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 HSD11B1P28845 292 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 GLRXP35754 106 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 RGS6P49758 472 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 DRAM2Q6UX65 266 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 UNQ6126/PRO20091Q6UXV3 157 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 C1orf174Q8IYL3 243 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF649Q9BS31 505 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 JAM3Q9BX67 310 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 C1QTNF5Q9BXJ0 243 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 BCL2L14Q9BZR8 327 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 NIPAL2Q9H841 368 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 INPP5EQ9NRR6 644 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 FKBP14Q9NWM8 211 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 MRM2Q9UI43 246 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 IKZF2Q9UKS7 526 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 LRRC42Q9Y546 428 aa14.33□□□□□ -0.12
CHCHD3-201ENST00000262570 J3QW42 95 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 HS3ST1O14792 307 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 APOC1P02654 83 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 ADRA2AP08913 450 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 CCDC159P0C7I6 412 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 DCTDP32321 178 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 THBS4P35443 961 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 ST3GAL4Q11206 333 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 RFPL4BQ6ZWI9 263 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 LHFPL3Q86UP9 236 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF540Q8NDQ6 660 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 ABHD4Q8TB40 342 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 SNX33Q8WV41 574 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 TMEM171Q8WVE6 324 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 OR51B6Q9H340 312 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF442Q9H7R0 627 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 ERVK13-1Q9NX77 482 aa14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 DIMT1Q9UNQ2 313 aaKnown RBP14.32□□□□□ -0.12
CHCHD3-201ENST00000262570 GPRIN2O60269 458 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 SULT1C4O75897 302 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 SLC6A9P48067 706 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 CX3CR1P49238 355 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 RIDAP52758 137 aaKnown RBP14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 ERVS71-1P61550 626 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 MED21Q13503 144 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 GALEQ14376 348 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 CDONQ4KMG0 1287 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 VHLLQ6RSH7 139 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 PRSS45Q7RTY3 260 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF283Q8N7M2 679 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 OR1J1Q8NGS3 322 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 FBXW5Q969U6 566 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 APOBEC3DQ96AK3 386 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 TMEM80Q96HE8 168 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 DOK1Q99704 481 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 DHRS9Q9BPW9 319 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 SCN3BQ9NY72 215 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 STARD10Q9Y365 291 aa14.31□□□□□ -0.12
CHCHD3-201ENST00000262570 METTL15A6NJ78 407 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 LCATP04180 440 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 KRT8P05787 483 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 LCKP06239 509 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 LIMS3P0CW19 117 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 LIMS4P0CW20 117 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 CRHBPP24387 322 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 APOBEC3AP31941 199 aaPredicted RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 KRTAP10-9P60411 292 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 PPP1CBP62140 327 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 RPS23P62266 143 aaKnown RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 MVKQ03426 396 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 MSMPQ1L6U9 139 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF544Q6NX49 715 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 PLEKHG7Q6ZR37 379 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 AHSA2Q719I0 299 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 KCTD20Q7Z5Y7 419 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF611Q8N823 705 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 COG8Q96MW5 612 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ALG8Q9BVK2 526 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 TPRKBQ9Y3C4 175 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ABCA12Q86UK0 2595 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 APCP25054 2843 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 PTGES3LE9PB15 166 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 SLC2A1P11166 492 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 TUBG1P23258 451 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ANOS1P23352 680 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 C21orf33P30042 268 aaPredicted RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 MMP16P51512 607 aa14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 ZNF121P58317 390 aaPredicted RBP14.3□□□□□ -0.12
CHCHD3-201ENST00000262570 PSMA6P60900 246 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms