RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SMCO1Q147U7 214 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 EBPQ15125 230 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF74Q16587 644 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 PLEKHN1Q494U1 663 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 LEG1Q6P5S2 330 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 UBALD2Q8IYN6 164 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 OR4K17Q8NGC6 315 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 OR13C8Q8NGS7 320 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZPLD1Q8TCW7 415 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 FOXRED1Q96CU9 486 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SEC22AQ96IW7 307 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ELF4Q99607 663 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 NRIP2Q9BQI9 281 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 TINAGL1Q9GZM7 467 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 FBXO4Q9UKT5 387 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 KLHDC2Q9Y2U9 406 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 TMEM14AQ9Y6G1 99 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 TRAV20A0A0B4J274 112 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 BLOC1S5-TXNDC5H3BN57 136 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 K7ESF4 209 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 FAM157CP0CG43 387 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 PSMB6P28072 239 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 GRPRP30550 384 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 HOXA6P31267 233 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC6A9P48067 706 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SRSF3P84103 164 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 CYCSP99999 105 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 NSDHLQ15738 373 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 CD226Q15762 336 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 LRRC37A5PQ49AS3 106 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 PHF19Q5T6S3 580 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 AWAT2Q6E213 333 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 RABEPKQ7Z6M1 372 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 JAZF1Q86VZ6 243 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 LSRQ86X29 649 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 PAQR4Q8N4S7 273 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF561Q8N587 486 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF511Q8NB15 262 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 OR1N1Q8NGS0 311 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF563Q8TA94 476 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 TSLPQ969D9 159 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 RASD2Q96D21 266 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 TGIF2Q9GZN2 237 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SUSD2Q9UGT4 822 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 C9orf170A2RU37 121 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 OR2W5A6NFC9 320 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 TVP23AA6NH52 213 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ALG1L2C9J202 215 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 M0QYG6 137 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 SSX5O60225 188 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 TXNDC12O95881 172 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 S100A6P06703 90 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 FOLR1P15328 257 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 FOSL1P15407 271 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 PGCP20142 388 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ABCD3P28288 659 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 PMELP40967 661 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 CDKN2AP42771 156 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 HAAOP46952 286 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 CAV2P51636 162 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 CCR4P51679 360 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 DMWDQ09019 674 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ATXN7L3Q14CW9 347 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 NKPD1Q17RQ9 610 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 MST1LQ2TV78 715 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 CDNFQ49AH0 187 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 C5orf46Q6UWT4 87 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 UNQ6126/PRO20091Q6UXV3 157 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ZFP82Q8N141 532 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC25A45Q8N413 288 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 KDF1Q8NAX2 398 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 PTX4Q96A99 478 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF501Q96CX3 271 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 C4orf45Q96LM5 186 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF587Q96SQ5 575 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 NUDT9Q9BW91 350 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 NMES1Q9C002 83 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 ADAM19Q9H013 955 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 WDR76Q9H967 626 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 SEC61A2Q9H9S3 476 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 MMP25Q9NPA2 562 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 CYTL1Q9NRR1 136 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC22A11Q9NSA0 550 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 FGF21Q9NSA1 209 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 DHCR7Q9UBM7 475 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 LAMP5Q9UJQ1 280 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 VSIG4Q9Y279 399 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 POMT1Q9Y6A1 747 aa9.67□□□□□ -0.86
CHRNA1-201ENST00000261007 CCSO14618 274 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 TSPAN2O60636 221 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 CRHP06850 196 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ASAH2BP0C7U1 165 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 PGAM2P15259 253 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 ALOX5APP20292 161 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 SDHAP31040 664 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 CX3CR1P49238 355 aa9.66□□□□□ -0.86
CHRNA1-201ENST00000261007 CFHR1Q03591 330 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms