RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 RAB3IPQ96QF0 476 aaPredicted RBP7.28□□□□□ -1.24
TMEM258-201ENST00000257262 CIB1Q99828 191 aa7.28□□□□□ -1.24
TMEM258-201ENST00000257262 ATF6BQ99941 703 aa7.28□□□□□ -1.24
TMEM258-201ENST00000257262 OSBPL10Q9BXB5 764 aa7.28□□□□□ -1.24
TMEM258-201ENST00000257262 TEX12Q9BXU0 123 aa7.28□□□□□ -1.24
TMEM258-201ENST00000257262 HINT3Q9NQE9 182 aaKnown RBP7.28□□□□□ -1.24
TMEM258-201ENST00000257262 TMEFF2Q9UIK5 374 aaPredicted RBP7.28□□□□□ -1.24
TMEM258-201ENST00000257262 GPR160Q9UJ42 338 aa7.28□□□□□ -1.24
TMEM258-201ENST00000257262 OAZ3Q9UMX2 235 aa7.28□□□□□ -1.24
TMEM258-201ENST00000257262 CHD3Q12873 2000 aaKnown RBP7.28□□□□□ -1.24
TMEM258-201ENST00000257262 LOC390937A0A1W2PQ73 354 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ZAR1LA6NP61 321 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 VWC2LB2RUY7 222 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 F5H5K5 113 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 LY6G6DO95868 133 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 HPXP02790 462 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 CSF3P09919 207 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ACSM4P0C7M7 580 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 SLC25A16P16260 332 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 TUBG1P23258 451 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 IGFBP5P24593 272 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 COL8A2P25067 703 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 GSTT1P30711 240 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 POLR2IP36954 125 aaKnown RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 RGS6P49758 472 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 PDLIM4P50479 330 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ZNF81P51508 661 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 CCL8P80075 99 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 EFNB1P98172 346 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 PPP2R2BQ00005 443 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ECH1Q13011 328 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 EIF2B1Q14232 305 aaKnown RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 KRTAP27-1Q3LI81 207 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 KLHL12Q53G59 568 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 SLX4IPQ5VYV7 408 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ZFP1Q6P2D0 407 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 Q71RC1 249 aaPredicted RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 CXXC5Q7LFL8 322 aaKnown RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 DPY19L4Q7Z388 723 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ERI1Q8IV48 349 aaKnown RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 TIGD4Q8IY51 512 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 C10orf67Q8IYJ2 551 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ZNF786Q8N393 782 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 TCEANCQ8N8B7 351 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 BBS1Q8NFJ9 593 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 OR5L1Q8NGL2 311 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 OR6N2Q8NGY6 317 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ST7LQ8TDW4 575 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 SNX33Q8WV41 574 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 GTF3AQ92664 365 aaKnown RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 APOBEC3DQ96AK3 386 aaPredicted RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 HAVCR1Q96D42 359 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 CMBLQ96DG6 245 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 ZMYND19Q96E35 227 aaPredicted RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 COG8Q96MW5 612 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 INTS14Q96SY0 518 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 TEAD3Q99594 435 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 C1QTNF5Q9BXJ0 243 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 MARCH7Q9H992 704 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 S100A14Q9HCY8 104 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 MYOZ1Q9NP98 299 aaPredicted RBP7.27□□□□□ -1.25
TMEM258-201ENST00000257262 TUBG2Q9NRH3 451 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 CENPMQ9NSP4 180 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 PTTG3PQ9NZH4 202 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 PLCE1Q9P212 2302 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 MED13LQ71F56 2210 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 CR1P17927 2039 aa7.27□□□□□ -1.25
TMEM258-201ENST00000257262 FLNAP21333 2647 aaKnown RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 USF3Q68DE3 2245 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 ZNF469Q96JG9 3925 aaPredicted RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 A0A096LNT2 108 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 PLSCR5A0PG75 271 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 H3BSA7 217 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 NDUFS8O00217 210 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 PRODHO43272 600 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 SPRY3O43610 288 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 TLX2O43763 284 aaPredicted RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 PRKYO43930 277 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 TIMM8AO60220 97 aaPredicted RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 SELENOFO60613 162 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 NCR1O76036 304 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 IGHV1-46P01743 117 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 MT-ND5P03915 603 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 LCATP04180 440 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 SLC2A5P22732 501 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 MAP2K3P46734 347 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 PRKXP51817 358 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 TPTEP56180 551 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 RPS7P62081 194 aaKnown RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 APOFQ13790 326 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 HLXQ14774 488 aaPredicted RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 TSTQ16762 297 aaKnown RBP7.26□□□□□ -1.25
TMEM258-201ENST00000257262 SLC35D3Q5M8T2 416 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 C12orf73Q69YU5 71 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 CLEC9AQ6UXN8 241 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 SPATC1Q76KD6 591 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 SHFQ7M4L6 423 aa7.26□□□□□ -1.25
TMEM258-201ENST00000257262 BCDIN3DQ7Z5W3 292 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms