RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 FER1L6Q2WGJ9 1857 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TAGLN2P37802 199 aaKnown RBP16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 DHRS13Q6UX07 377 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TFAP2EQ6VUC0 442 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 RNF141Q8WVD5 230 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 PLEKHB1Q9UF11 243 aaPredicted RBP16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 ZAR1LA6NP61 321 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 CXCL10P02778 98 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 SFTPA1Q8IWL2 248 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TCTN1Q2MV58 587 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 C2orf76Q3KRA6 126 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 PLAC9Q5JTB6 97 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 SIGLEC11Q96RL6 698 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 SMCO4Q9NRQ5 59 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 B3GALT5Q9Y2C3 310 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 CRYAAP02489 173 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 NKX2-1P43699 371 aaPredicted RBP16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 NOVA1P51513 510 aaKnown RBP16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 SRPXP78539 464 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 C16orf47Q6ZP98 133 aaPredicted RBP16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 KCNRGQ8N5I3 272 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TEX101Q9BY14 249 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC6A13Q9NSD5 602 aa16.94■□□□□ 0.3
SMARCC1-201ENST00000254480 TGM6O95932 706 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 APOA2P02652 100 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 CPEP16870 476 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 SPINK2P20155 84 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 DIO1P49895 249 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 TIMD4Q96H15 378 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 ATF6BQ99941 703 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 TMEM231Q9H6L2 316 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 TMEM129A0AVI4 362 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 SH2D1BO14796 132 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 KLK10O43240 276 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 THBS3P49746 956 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 WIPI1Q5MNZ9 446 aaPredicted RBP16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 CMTM4Q8IZR5 234 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 AUNIPQ9H7T9 357 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 SNRPNP63162 240 aaKnown RBP16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 PRSS41Q7RTY9 318 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 OXGR1Q96P68 337 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 TCRBV5S2A0A599 114 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 TRAF3IP2O43734 574 aaPredicted RBP16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 OLFM2O95897 454 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 ZNF121P58317 390 aaPredicted RBP16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 PCK2Q16822 640 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 S100A7AQ86SG5 101 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 AMER3Q8N944 861 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 NECAP1Q8NC96 275 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 BHLHE40O14503 412 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 GPR12P47775 334 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC25A26Q70HW3 274 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 TMEM200AQ86VY9 491 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 BAGE3Q86Y29 109 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 BAGE2Q86Y30 109 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 FAM26EQ8N5C1 309 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 NRTNQ99748 197 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 NUDT9Q9BW91 350 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 GAB2Q9UQC2 676 aa16.93■□□□□ 0.3
SMARCC1-201ENST00000254480 ZNF266Q14584 549 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 YIPF5Q969M3 257 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 MAGT1Q9H0U3 335 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 H3BMH7 237 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 RPS16P62249 146 aaKnown RBP16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 HAGHQ16775 308 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 GCNT2Q8N0V5 402 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 R4GN57 208 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 SPTY2D1-AS1A0A0U1RR47 76 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 SLC22A20A6NK97 555 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 ABCD4O14678 606 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 OR2L13Q8N349 312 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 OR11G2Q8NGC1 345 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 KTI12Q96EK9 354 aaPredicted RBP16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 DOC2BQ14184 412 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 PDZD11Q5EBL8 140 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 BPIFCQ8NFQ6 507 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 POMT2Q9UKY4 750 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 SCN9AQ15858 1988 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 A0A1W2PPH5 198 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 HRH1P35367 487 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 NAA40Q86UY6 237 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 SPEM1Q8N4L4 309 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 OR6K3Q8NGY3 331 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 GNRHR2Q96P88 292 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
SMARCC1-201ENST00000254480 HBE1P02100 147 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 HOXB3P14651 431 aaPredicted RBP16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 SRSF5Q13243 272 aaKnown RBP16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 PLXDC2Q6UX71 529 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 GABRG1Q8N1C3 465 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 EXD3Q8N9H8 876 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 GDF2Q9UK05 429 aaPredicted RBP16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 AQP7P3A6NL99 342 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 ANGPTL7O43827 346 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 CELA2BP08218 269 aaPredicted RBP16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 FAHP16930 419 aa16.91■□□□□ 0.3
SMARCC1-201ENST00000254480 LCN15Q6UWW0 184 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms