RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 DCDP81605 110 aaKnown RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF345Q14585 488 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 ELP2Q6IA86 826 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 BPIFCQ8NFQ6 507 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 C8orf44Q96CB5 159 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 GAL3ST1Q99999 423 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 TNFSF18Q9UNG2 199 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 OR2F2O95006 317 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 S100A6P06703 90 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 HPGDP15428 266 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 CD34P28906 385 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 OR2F1Q13607 317 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 ELAVL1Q15717 326 aaKnown RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 LPCAT3Q6P1A2 487 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 SLC35D2Q76EJ3 337 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 C9orf40Q8IXQ3 194 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 THAP3Q8WTV1 239 aaPredicted RBP15.18■□□□□ 0.02
FOXA1-201ENST00000250448 DHDHQ9UQ10 334 aa15.18■□□□□ 0.02
FOXA1-201ENST00000250448 KMT2EQ8IZD2 1858 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 CACNA1CQ13936 2221 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 ALOX12BO75342 701 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 IGKV3-11P04433 115 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF735P0CB33 412 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 CD96P40200 585 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 SRSF4Q08170 494 aaKnown RBP15.17■□□□□ 0.02
FOXA1-201ENST00000250448 SPEM2Q0P670 501 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 DHRS2Q13268 280 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 FAM209BQ5JX69 171 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 TMEM225Q6GV28 225 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 MED25Q71SY5 747 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 TAAR8Q969N4 342 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF524Q96C55 264 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 C17orf51A8MQB3 221 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 GMFGO60234 142 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 HLA-DQA2P01906 255 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 HEXBP07686 556 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 SLC25A4P12235 298 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 CNR1P21554 472 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 HTR2CP28335 458 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 ZFP36L1Q07352 338 aaKnown RBP15.17■□□□□ 0.02
FOXA1-201ENST00000250448 AGBL5Q8NDL9 886 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 RNF128Q8TEB7 428 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF75AQ96N20 296 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 VRK1Q99986 396 aaPredicted RBP15.17■□□□□ 0.02
FOXA1-201ENST00000250448 NKX6-2Q9C056 277 aaPredicted RBP15.17■□□□□ 0.02
FOXA1-201ENST00000250448 UBQLN4Q9NRR5 601 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 COMMD9Q9P000 198 aa15.17■□□□□ 0.02
FOXA1-201ENST00000250448 NOP16Q9Y3C1 178 aaKnown RBP15.17■□□□□ 0.02
FOXA1-201ENST00000250448 PNPP00491 289 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 CD59P13987 128 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 TACR3P29371 465 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF385CQ66K41 422 aaPredicted RBP15.16■□□□□ 0.02
FOXA1-201ENST00000250448 C11orf87Q6NUJ2 197 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 NDUFAF7Q7L592 441 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 OR2W3Q7Z3T1 314 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ASB17Q8WXJ9 295 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 PPP1R14AQ96A00 147 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 FOXN4Q96NZ1 517 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 PDCD10Q9BUL8 212 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 EDEM2Q9BV94 578 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 TAS2R4Q9NYW5 299 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 PRODH2Q9UF12 536 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 SCDO00767 359 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ABCD4O14678 606 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF264O43296 627 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 GALR2O43603 387 aaPredicted RBP15.16■□□□□ 0.02
FOXA1-201ENST00000250448 CYB5AP00167 134 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 RORAP35398 523 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 NR0B1P51843 470 aaKnown RBP15.16■□□□□ 0.02
FOXA1-201ENST00000250448 MFGE8Q08431 387 aaPredicted RBP15.16■□□□□ 0.02
FOXA1-201ENST00000250448 LIN54Q6MZP7 749 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF679Q8IYX0 411 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 BPIFB2Q8N4F0 458 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF563Q8TA94 476 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 KLHDC3Q9BQ90 382 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 PTDSS2Q9BVG9 487 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF471Q9BX82 626 aaPredicted RBP15.16■□□□□ 0.02
FOXA1-201ENST00000250448 SLCO5A1Q9H2Y9 848 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 CKLFQ9UBR5 152 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 CYB5R1Q9UHQ9 305 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 RPH3AQ9Y2J0 694 aaPredicted RBP15.16■□□□□ 0.02
FOXA1-201ENST00000250448 PRELID3BQ9Y3B1 194 aa15.16■□□□□ 0.02
FOXA1-201ENST00000250448 ZNF736B4DX44 427 aaPredicted RBP15.15■□□□□ 0.02
FOXA1-201ENST00000250448 CCSO14618 274 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 CD74P04233 296 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 DLSTP36957 453 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 LRRC37A5PQ49AS3 106 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 PDSS1Q5T2R2 415 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 DBX2Q6ZNG2 339 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 ADGRE4PQ86SQ3 457 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 OR5T2Q8NGG2 359 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 AHCTF1Q8WYP5 2266 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 NARS2Q96I59 477 aaKnown RBP15.15■□□□□ 0.02
FOXA1-201ENST00000250448 ADOQ96SZ5 270 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 CGGBP1Q9UFW8 167 aaPredicted RBP15.15■□□□□ 0.02
FOXA1-201ENST00000250448 RNF222A6NCQ9 220 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 XKRYO14609 159 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 HLA-AP01891 365 aaKnown RBP15.15■□□□□ 0.02
FOXA1-201ENST00000250448 GP1BAP07359 652 aa15.15■□□□□ 0.02
FOXA1-201ENST00000250448 ACP1P24666 158 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms