RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ACBD4Q8NC06 268 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 OR52H1Q8NGJ2 320 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 PRMT8Q9NR22 394 aaPredicted RBP14.02□□□□□ -0.17
LRFN1-201ENST00000248668 PMS2P1A4D2B8 440 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 PYCARD-AS1I3L0S3 204 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 RER1O15258 196 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 SULT1B1O43704 296 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 MPC2O95563 127 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 CD3DP04234 171 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 ACSM4P0C7M7 580 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF43P17038 809 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 RNF144BQ7Z419 303 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 OR4D6Q8NGJ1 314 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 NECAB3Q96P71 396 aaPredicted RBP14.01□□□□□ -0.17
LRFN1-201ENST00000248668 MRI1Q9BV20 369 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 HEXA-AS1Q9H8Q6 139 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 IFT46Q9NQC8 304 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 RAB19A4D1S5 217 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 LGALS8O00214 317 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 BET1O15155 118 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 SRSF10O75494 262 aaKnown RBP14.01□□□□□ -0.17
LRFN1-201ENST00000248668 KLHL24Q6TFL4 600 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 FAM198BQ6UWH4 519 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 TMEM156Q8N614 296 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 ELP5Q8TE02 316 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 RBPMSQ93062 196 aaKnown RBP14.01□□□□□ -0.17
LRFN1-201ENST00000248668 CMBLQ96DG6 245 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 GPR137Q96N19 417 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 GINS4Q9BRT9 223 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 POTEKPQ9BYX7 375 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 PTGES2Q9H7Z7 377 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 CA10Q9NS85 328 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 HS3ST3B1Q9Y662 390 aa14.01□□□□□ -0.17
LRFN1-201ENST00000248668 NCOA6Q14686 2063 aaPredicted RBP14.01□□□□□ -0.17
LRFN1-201ENST00000248668 HSPB2A8KAH6 182 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 SIGLEC5O15389 551 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 FGF5P12034 268 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 DNASE1P24855 282 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 MNDAP41218 407 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 SIGLEC14Q08ET2 396 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 HSPB2Q16082 182 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 RSPO4Q2I0M5 234 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF468Q5VIY5 522 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 B3GNTL1Q67FW5 361 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 WDR5BQ86VZ2 330 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 MAML2Q8IZL2 1156 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 OR51S1Q8NGJ8 323 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 OR13C9Q8NGT0 318 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 OR51E1Q8TCB6 317 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 MGAT4CQ9UBM8 478 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 GDF2Q9UK05 429 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 TPRP12270 2363 aaKnown RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 M0QYG6 137 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 TRAF3IP2O43734 574 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 KLF7O75840 302 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 MSX1P28360 303 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 LAP3P28838 519 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 PRSS3P35030 304 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 TAF13Q15543 124 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 MEIOBQ8N635 442 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 RNF133Q8WVZ7 376 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 ADAT3Q96EY9 351 aaPredicted RBP14□□□□□ -0.17
LRFN1-201ENST00000248668 ACTR6Q9GZN1 396 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 IGHV1-45A0A0A0MS14 117 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF98A6NK75 572 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 POM121CA8CG34 1229 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 C9J4A7 227 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 H7C417 338 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 SYT7O43581 403 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 SIX6O95475 246 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 IGHG1P01857 330 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 QDPRP09417 244 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 SULT1A3P0DMM9 295 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 SULT1A4P0DMN0 295 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 CLDN17P56750 224 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 C17orf107Q6ZR85 190 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 FGD2Q7Z6J4 655 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 OR52N4Q8NGI2 321 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 DLL4Q9NR61 685 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 MTFP1Q9UDX5 166 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 B3GALT1Q9Y5Z6 326 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 LHFPL6Q9Y693 200 aa14□□□□□ -0.17
LRFN1-201ENST00000248668 TP53I11O14683 189 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 TTRP02766 147 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 HSD11B1P28845 292 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 HAAOP46952 286 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 ARHGDIBP52566 201 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 NLRC3Q7RTR2 1065 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 RTN4RL2Q86UN3 420 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 NOXO1Q8NFA2 376 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 OR6M1Q8NGM8 313 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 SLC25A28Q96A46 364 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 UCN2Q96RP3 112 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 PBOV1Q9GZY1 135 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 SLC26A1Q9H2B4 701 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 C1orf198Q9H425 327 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 SLC39A1Q9NY26 324 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 TMEM235A6NFC5 223 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF726A6NNF4 738 aa13.99□□□□□ -0.17
LRFN1-201ENST00000248668 PGA4P0DJD7 388 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms