RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 RHOUQ7L0Q8 258 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 OR10H5Q8NGA6 315 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 OR51E1Q8TCB6 317 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 RNF133Q8WVZ7 376 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 PBOV1Q9GZY1 135 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 B3GAT1Q9P2W7 334 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 TEX51A0A1B0GUA7 166 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 TTLL8A6PVC2 850 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 HLA-AP01891 365 aaKnown RBP22.73■■□□□ 1.23
RAB40C-201ENST00000248139 NKAIN1Q4KMZ8 207 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 TMEM244Q5VVB8 128 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 COMMD2Q86X83 199 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 OR2I1PQ8NGU4 316 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 MRGPRFQ96AM1 343 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 NICN1Q9BSH3 213 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 C1orf198Q9H425 327 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 LIPT2A6NK58 231 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 VSTM2BA6NLU5 285 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 FAM25EA8MYX2 175 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 PMS2P2O95744 297 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 ISG15P05161 165 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 FOSL2P15408 326 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 BDKRB2P30411 391 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 GK2Q14410 553 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-201ENST00000248139 C1orf100Q5SVJ3 147 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 PTCRAQ6ISU1 281 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-201ENST00000248139 DNM1P34Q6PK57 102 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF546Q86UE3 836 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 BEST3Q8N1M1 668 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 WDR13Q9H1Z4 485 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 H3BUI4 141 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 BCAT2O15382 392 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-201ENST00000248139 STPG2Q8N412 459 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 SCARB1Q8WTV0 552 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 ST8SIA1Q92185 356 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 PHF7Q9BWX1 381 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-201ENST00000248139 ARID1AO14497 2285 aa22.72■■□□□ 1.23
RAB40C-201ENST00000248139 VSIG8P0DPA2 414 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 SFTPDP35247 375 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 APOBEC1P41238 236 aaKnown RBP22.71■■□□□ 1.23
RAB40C-201ENST00000248139 GMFBP60983 142 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 TAF13Q15543 124 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 PCK2Q16822 640 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF260Q3ZCT1 412 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 DDIT4LQ96D03 193 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 SELENOIQ9C0D9 397 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 PLEKHA6Q9Y2H5 1048 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 POLR1DQ9Y2S0 133 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 MEGF11A6BM72 1044 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 B3GALNT1O75752 331 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 OR2J2O76002 312 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 CASTOR1Q8WTX7 329 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 ST8SIA4Q92187 359 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 CST11Q9H112 138 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 PPP4R1LQ9P1A2 415 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 UPB1Q9UBR1 384 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 EML6Q6ZMW3 1958 aa22.71■■□□□ 1.23
RAB40C-201ENST00000248139 AVPR2P30518 371 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 ZP4Q12836 540 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 RHBDD2Q6NTF9 364 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 POC1BQ8TC44 478 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 CCDC107Q8WV48 283 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 WDR77Q9BQA1 342 aaPredicted RBP22.7■■□□□ 1.22
RAB40C-201ENST00000248139 PDCD10Q9BUL8 212 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 ZNF319Q9P2F9 582 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 CYB5R1Q9UHQ9 305 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 A0A1W2PP11 408 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 LOC390937A0A1W2PQ73 354 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 SULT1C2O00338 296 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 UBCP0CG48 685 aaKnown RBP22.7■■□□□ 1.22
RAB40C-201ENST00000248139 M6PRP20645 277 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 CD34P28906 385 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 KLHL24Q6TFL4 600 aa22.7■■□□□ 1.22
RAB40C-201ENST00000248139 SLC25A21Q9BQT8 299 aaPredicted RBP22.7■■□□□ 1.22
RAB40C-201ENST00000248139 OR14I1A6ND48 311 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 OR5H14A6NHG9 310 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 AQP8O94778 261 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 HRH1P35367 487 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 MMP16P51512 607 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 BTN1A1Q13410 526 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 PPP1R1AQ13522 171 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 RNASE10Q5GAN6 216 aaKnown RBP22.69■■□□□ 1.22
RAB40C-201ENST00000248139 ANGPTL5Q86XS5 388 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 OR1M1Q8NGA1 313 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 AQP3Q92482 292 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 ALX4Q9H161 411 aaPredicted RBP22.69■■□□□ 1.22
RAB40C-201ENST00000248139 ZNF768Q9H5H4 540 aaKnown RBP22.69■■□□□ 1.22
RAB40C-201ENST00000248139 RFPL4AA6NLU0 287 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 RFPL4AL1F8VTS6 287 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 NUPL2O15504 423 aaKnown RBP22.69■■□□□ 1.22
RAB40C-201ENST00000248139 CD37P11049 281 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 CD96P40200 585 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 CLDN6P56747 220 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 RSPO4Q2I0M5 234 aaPredicted RBP22.69■■□□□ 1.22
RAB40C-201ENST00000248139 GUSBP11Q6P575 273 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 ADAD2Q8NCV1 583 aaKnown RBP22.69■■□□□ 1.22
RAB40C-201ENST00000248139 OR1S1Q8NH92 325 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 OR5B2Q96R09 309 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 SCPEP1Q9HB40 452 aa22.69■■□□□ 1.22
RAB40C-201ENST00000248139 GPR160Q9UJ42 338 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms