RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PAQR4Q8N4S7 273 aaPredicted RBP9.7□□□□□ -0.86
SF3B6-201ENST00000233468 TCEANCQ8N8B7 351 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 PLPP7Q8NBV4 271 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 OR6N2Q8NGY6 317 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 RFKQ969G6 155 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 APOBEC3DQ96AK3 386 aaPredicted RBP9.7□□□□□ -0.86
SF3B6-201ENST00000233468 RDH12Q96NR8 316 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 MDFIQ99750 246 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 VCXQ9H320 206 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 TOR3AQ9H497 397 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 MED20Q9H944 212 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 MYOZ1Q9NP98 299 aaPredicted RBP9.7□□□□□ -0.86
SF3B6-201ENST00000233468 HINT3Q9NQE9 182 aaKnown RBP9.7□□□□□ -0.86
SF3B6-201ENST00000233468 CYSLTR2Q9NS75 346 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 CGGBP1Q9UFW8 167 aaPredicted RBP9.7□□□□□ -0.86
SF3B6-201ENST00000233468 TMEM14AQ9Y6G1 99 aa9.7□□□□□ -0.86
SF3B6-201ENST00000233468 PLSCR5A0PG75 271 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF878C9JN71 531 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 F5H5K5 113 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 PRKYO43930 277 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 GPRIN2O60269 458 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MPZL2O60487 215 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 CSF3P09919 207 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 CLUP10909 449 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 ANPEPP15144 967 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 EFNA4P52798 201 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 GRB2P62993 217 aaKnown RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 POU4F2Q12837 409 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MALLQ13021 153 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 TMED1Q13445 227 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 APOFQ13790 326 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 EIF2B1Q14232 305 aaKnown RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 RCN1Q15293 331 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 TRIP10Q15642 601 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MST1LQ2TV78 715 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 ZMAT1Q5H9K5 638 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 Q5PR19 223 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MBNL2Q5VZF2 373 aaKnown RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 USF3Q68DE3 2245 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 PACRGLQ8N7B6 248 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 NEU4Q8WWR8 484 aaPredicted RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 ZMYND19Q96E35 227 aaPredicted RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MNTQ99583 582 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 TEAD3Q99594 435 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 DOK1Q99704 481 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 VRK1Q99986 396 aaPredicted RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 COPS4Q9BT78 406 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 HCAR1Q9BXC0 346 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MRPL37Q9BZE1 423 aaKnown RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 OR51B6Q9H340 312 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 DCLRE1BQ9H816 532 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 WDR76Q9H967 626 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 MARCH7Q9H992 704 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 CENPMQ9NSP4 180 aa9.69□□□□□ -0.86
SF3B6-201ENST00000233468 DDX28Q9NUL7 540 aaKnown RBP9.69□□□□□ -0.86
SF3B6-201ENST00000233468 COL6A5A8TX70 2615 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 IGLV3-9A0A075B6K5 115 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 H0YHG0 523 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 H7C1Q1 480 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 M0R135 149 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 PHYHO14832 338 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 IGHV3-13P01766 116 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 HEXAP06865 529 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 LYNP07948 512 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 SELEP16581 610 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 HSD11B1P28845 292 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 WNT5AP41221 380 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 PCGF3Q3KNV8 242 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 FAM209AQ5JX71 171 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 MEDAGQ5VYS4 303 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 OTPQ5XKR4 325 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 KCTD18Q6PI47 426 aaPredicted RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 DRAM2Q6UX65 266 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 CFAP77Q6ZQR2 320 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 MEPCEQ7L2J0 689 aaKnown RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 SLC16A9Q7RTY1 509 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 DPY19L4Q7Z388 723 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 TIGD4Q8IY51 512 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF101Q8IZC7 436 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF555Q8NEP9 628 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 OTOSQ8NHW6 89 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 FAM81AQ8TBF8 368 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 SLC25A40Q8TBP6 338 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 KLF14Q8TD94 323 aaPredicted RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 ZNRF4Q8WWF5 429 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 SLAMF6Q96DU3 332 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 ZNF799Q96GE5 643 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 MARS2Q96GW9 593 aaKnown RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 HRASLS5Q96KN8 279 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 Q96MF0 132 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 Q96MT0 163 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 IL4I1Q96RQ9 567 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 MYCBPQ99417 103 aaPredicted RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 CNN2Q99439 309 aaKnown RBP9.68□□□□□ -0.86
SF3B6-201ENST00000233468 KCNJ15Q99712 375 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 SYT3Q9BQG1 590 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 OR2J1Q9GZK6 312 aa9.68□□□□□ -0.86
SF3B6-201ENST00000233468 YIPF3Q9GZM5 350 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms