RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SOCS5O75159 536 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 SCAF4O95104 1147 aaKnown RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 ASGR1P07306 291 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 AKR1C4P17516 323 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 C2orf76Q3KRA6 126 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 PRAMEF8Q5VWM4 474 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 PRAMEF7Q5VXH5 474 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 WDR34Q96EX3 536 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 INTS14Q96SY0 518 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 KCNK15Q9H427 330 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 SEPSECSQ9HD40 501 aaKnown RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 NUP210LQ5VU65 1888 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 HSD17B6O14756 317 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 PLRG1O43660 514 aaKnown RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 FGF5P12034 268 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 SOX2P48431 317 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 ADAM8P78325 824 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 MAP2K5Q13163 448 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 GAS6Q14393 721 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 Q8NFD4 153 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 TMEM40Q8WWA1 233 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 PAAF1Q9BRP4 392 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 ZNF2Q9BSG1 426 aaPredicted RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 CDH20Q9HBT6 801 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 LUZP4Q9P127 313 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 POLR3KQ9Y2Y1 108 aaPredicted RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 MBPP02686 304 aaPredicted RBP11.69□□□□□ -0.54
MSH2-201ENST00000233146 PBX2P40425 430 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 ARF5P84085 180 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 H3F3AP84243 136 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 RAB32Q13637 225 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 C11orf42Q8N5U0 333 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 C20orf141Q9NUB4 165 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 ZFP37Q9Y6Q3 630 aaPredicted RBP11.69□□□□□ -0.54
MSH2-201ENST00000233146 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 DNAJB6O75190 326 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 PPBPP02775 128 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 FOLR1P15328 257 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 SLC35A1P78382 337 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 HSF1Q00613 529 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 CXorf40AQ8TE69 158 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 EFCAB11Q9BUY7 163 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 ARV1Q9H2C2 271 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 R3HDMLQ9H3Y0 253 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 KLK13Q9UKR3 277 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 SRPK3Q9UPE1 567 aa11.69□□□□□ -0.54
MSH2-201ENST00000233146 LEFTY1O75610 366 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 STK17BO94768 372 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 SLC35G6P0C7Q6 338 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 CAMLGP49069 296 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 FHITP49789 147 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 SGSHP51688 502 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 CDC42EP1Q00587 391 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 IL15RAQ13261 267 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 OPN5Q6U736 354 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 SLC25A26Q70HW3 274 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 NUFIP2Q7Z417 695 aaKnown RBP11.68□□□□□ -0.54
MSH2-201ENST00000233146 FAM185AQ8N0U4 392 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 C1orf87Q8N0U7 546 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 GCNT2Q8N0V5 402 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 RARRES2Q99969 163 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 RAB18Q9NP72 206 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 ZCCHC3Q9NUD5 404 aaKnown RBP11.68□□□□□ -0.54
MSH2-201ENST00000233146 SIGLEC7Q9Y286 467 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 KCNE3Q9Y6H6 103 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 ANAPC1Q9H1A4 1944 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 TRBV11-1A0A0K0K1C0 115 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 LOC100289279A0A1B0GTE1 492 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 OR4C45A6NMZ5 311 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 CCL25O15444 150 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 LSSP48449 732 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 SLC25A1P53007 311 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
MSH2-201ENST00000233146 C9orf40Q8IXQ3 194 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
MSH2-201ENST00000233146 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 METTL21AQ8WXB1 218 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 CCDC74AQ96AQ1 378 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 TMEM159Q96B96 161 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 FAM3DQ96BQ1 224 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 WFIKKN1Q96NZ8 548 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 OR2J1Q9GZK6 312 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 CLDND1Q9NY35 253 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 FBXL17Q9UF56 701 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 DKKL1Q9UK85 242 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 KCNK6Q9Y257 313 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 HEATR5AQ86XA9 2040 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 TRBV5-7A0A0A0MS05 114 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 C20orf202A1L168 122 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 A6NCN8 305 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 WNT10BO00744 389 aa11.68□□□□□ -0.54
MSH2-201ENST00000233146 PET100P0DJ07 73 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms