RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 RAB6AP20340 208 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 NTSR1P30989 418 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 RAB2AP61019 212 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 DMWDQ09019 674 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 PMPCAQ10713 525 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 ZNF124Q15973 351 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 PARM1Q6UWI2 310 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 IL34Q6ZMJ4 242 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 ZNF584Q8IVC4 421 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 CSNK1A1LQ8N752 337 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 OR52R1Q8NGF1 315 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 ZNF417Q8TAU3 575 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 CA5BP1Q8WTZ4 195 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 EDAQ92838 391 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 FGF14Q92915 247 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 RERGQ96A58 199 aaPredicted RBP12.64□□□□□ -0.39
SF1-201ENST00000227503 PIGQQ9BRB3 760 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 TGIF2Q9GZN2 237 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 RAB33BQ9H082 229 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 COMMD4Q9H0A8 199 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 PRO1933Q9H354 126 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 TAS2R4Q9NYW5 299 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 SPACA6W5XKT8 324 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 METTL12A8MUP2 240 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 STK17BO94768 372 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 HRH1P35367 487 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 P2RY4P51582 365 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 PSG6Q00889 435 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 SLC25A42Q86VD7 318 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 SLC43A2Q8N370 569 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 JAGN1Q8N5M9 183 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 BAHD1Q8TBE0 780 aaPredicted RBP12.64□□□□□ -0.39
SF1-201ENST00000227503 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 TMEM41AQ96HV5 264 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 EDEM2Q9BV94 578 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 CERS4Q9HA82 394 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 ATG2AQ2TAZ0 1938 aa12.64□□□□□ -0.39
SF1-201ENST00000227503 AP4M1O00189 453 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 LMX1BO60663 402 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 MT-ND4LP03901 98 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 TACSTD2P09758 323 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 S1PR1P21453 382 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 PPICP45877 212 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 SRSF4Q08170 494 aaKnown RBP12.63□□□□□ -0.39
SF1-201ENST00000227503 RNASE10Q5GAN6 216 aaKnown RBP12.63□□□□□ -0.39
SF1-201ENST00000227503 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 SGK3Q96BR1 496 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 C14orf144Q96I85 54 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 SLC41A2Q96JW4 573 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 TGM7Q96PF1 710 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 NMNAT2Q9BZQ4 307 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 TRIM2Q9C040 744 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 GSKIPQ9P0R6 139 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 PNPP00491 289 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 PMP2P02689 132 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 HTR5AP47898 357 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 GSK3AP49840 483 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 S100A10P60903 97 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 Q6ZRG5 221 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 FJX1Q86VR8 437 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 CCDC54Q8NEL0 328 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 ZNF775Q96BV0 537 aaPredicted RBP12.63□□□□□ -0.39
SF1-201ENST00000227503 JSRP1Q96MG2 331 aaPredicted RBP12.63□□□□□ -0.39
SF1-201ENST00000227503 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 DMRT1Q9Y5R6 373 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 FAM157AC9JC47 383 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 H7C1Q1 480 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 SLC17A2O00624 439 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 RDH16O75452 317 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 APBB3O95704 486 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 SSX9Q7RTT3 188 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 TRAPPC6BQ86SZ2 158 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 ARRDC1Q8N5I2 433 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 ZNF615Q8N8J6 731 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 MOGAT1Q96PD6 335 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 SPACA1Q9HBV2 294 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 STARD5Q9NSY2 213 aa12.63□□□□□ -0.39
SF1-201ENST00000227503 A0A1B0GTQ1 180 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 NME2P1O60361 137 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 FCGR3AP08637 254 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 TMEM244Q5VVB8 128 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
SF1-201ENST00000227503 MCHR2Q969V1 340 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 S100PBPQ96BU1 408 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 LMF2Q9BU23 707 aaKnown RBP12.62□□□□□ -0.39
SF1-201ENST00000227503 YBX2Q9Y2T7 364 aaKnown RBP12.62□□□□□ -0.39
SF1-201ENST00000227503 EFSO43281 561 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 HCRTR1O43613 425 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 CD5P06127 495 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 FHITP49789 147 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 NDUFA6P56556 154 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 ALG11Q2TAA5 492 aa12.62□□□□□ -0.39
SF1-201ENST00000227503 SLC16A9Q7RTY1 509 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms