RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 RAB3AP20336 220 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 CLDN6P56747 220 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 HLXQ14774 488 aaPredicted RBP19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 C2orf68Q2NKX9 166 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 NAXDQ8IW45 347 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 GALNT16Q8N428 558 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 BPIFB2Q8N4F0 458 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 FADS6Q8N9I5 356 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 OR10S1Q8NGN2 331 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 PRRT1Q99946 306 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 MED9Q9NWA0 146 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 XIRP2A4UGR9 3374 aa19.54■□□□□ 0.72
SMARCD2-201ENST00000225742 LOC101059948A0A1B0GTJ6 334 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 SHISA8B8ZZ34 492 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 TP53I11O14683 189 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 TRAF3IP2O43734 574 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 RP2O75695 350 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 M6PRP20645 277 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 ENPP1P22413 925 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 CALCRP30988 508 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 GNALP38405 381 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 QRFPP83859 136 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 LPCAT3Q6P1A2 487 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 OR1J2Q8NGS2 313 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 SAP25Q8TEE9 199 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 NAT6Q93015 286 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 HLA-CQ95604 372 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 NKX3-1Q99801 234 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 IER2Q9BTL4 223 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 B3GNT4Q9C0J1 378 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 TINAGL1Q9GZM7 467 aaPredicted RBP19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 CHST6Q9GZX3 395 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 PTGES2Q9H7Z7 377 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 WDR54Q9H977 334 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 NXT1Q9UKK6 140 aaKnown RBP19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 KLK13Q9UKR3 277 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 RAB27BO00194 218 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 SIX6O95475 246 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 NR2C1P13056 603 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 SRSF4Q08170 494 aaKnown RBP19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 AANATQ16613 207 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 MOGAT2Q3SYC2 334 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 C11orf88Q6PI97 169 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 CHMP1BQ7LBR1 199 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 DTWD2Q8NBA8 298 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 CDCP1Q9H5V8 836 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 KCNN3Q9UGI6 736 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 LHFPL6Q9Y693 200 aa19.53■□□□□ 0.72
SMARCD2-201ENST00000225742 A0A087WZY1 265 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 M0QYG6 137 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 SIGLEC6O43699 453 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 TBPP20226 339 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 ARPC4P59998 168 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 OR10K2Q6IF99 312 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 MRPL14Q6P1L8 145 aaKnown RBP19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 OR2W3Q7Z3T1 314 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 OR4K17Q8NGC6 315 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 ZBTB8AQ96BR9 441 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 ADAT3Q96EY9 351 aaPredicted RBP19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 WDR89Q96FK6 387 aaPredicted RBP19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 RASL10BQ96S79 203 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 POLR1DQ9Y2S0 133 aa19.52■□□□□ 0.72
SMARCD2-201ENST00000225742 A0A1B0GTI1 187 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 RFPL4AA6NLU0 287 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 RFPL4AL1F8VTS6 287 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 ARPC5O15511 151 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 RPA2P15927 270 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 ZNF20P17024 532 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 SLC35A1P78382 337 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 HIST3H3Q16695 136 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 ATPAF1Q5TC12 328 aaPredicted RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 TMEM81Q6P7N7 255 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 PGAP1Q75T13 922 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 FJX1Q86VR8 437 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 PAQR4Q8N4S7 273 aaPredicted RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 ZDHHC22Q8N966 263 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 ACBD4Q8NC06 268 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 OR52N4Q8NGI2 321 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 ELP5Q8TE02 316 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 SCARB1Q8WTV0 552 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 OR5B2Q96R09 309 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 TMEM235A6NFC5 223 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 I3L521 148 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 TLX3O43711 291 aaPredicted RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 CHRM2P08172 466 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 FGF5P12034 268 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 EIF1AXP47813 144 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 DHPSP49366 369 aaPredicted RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 FGL1Q08830 312 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 EIF3IQ13347 325 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 TAF13Q15543 124 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 FAM189A2Q15884 450 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 RNASE10Q5GAN6 216 aaKnown RBP19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 DCAF12L2Q5VW00 463 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 CFAP77Q6ZQR2 320 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 NUP50Q9UKX7 468 aa19.51■□□□□ 0.71
SMARCD2-201ENST00000225742 FXYD6-FXYD2A0A087WZ82 144 aa19.5■□□□□ 0.71
SMARCD2-201ENST00000225742 LOC102723996A0A087X1L8 192 aa19.5■□□□□ 0.71
SMARCD2-201ENST00000225742 CCDC163A0A0D9SF12 145 aa19.5■□□□□ 0.71
SMARCD2-201ENST00000225742 AQP7P3A6NL99 342 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms