RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 FapP97321 761 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 NogP97466 232 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Rpusd3Q14AI6 344 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Slc38a11Q3USY0 453 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 SrmQ64674 302 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 1700001K19RikQ80ZT1 219 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 PstkQ8BP74 359 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gpr18Q8K1Z6 331 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Slc9a8Q8R4D1 576 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr593Q8VF28 327 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 DynapQ9D7M5 161 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 1700013G24RikQ9DAC6 286 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Barx1Q9ER42 254 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Anxa10Q9QZ10 324 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr911-ps1A0A140T8K0 311 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tmem229aB9EJI9 371 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Dsg2O55111 1122 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Guca1aP43081 202 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Defa14P50712 85 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 ElobP62869 118 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Milr1Q3TB92 246 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Nkx6-3Q3UHX8 262 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 1700012B07RikQ3V0S8 276 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tacstd2Q8BGV3 317 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cwh43Q91YL7 699 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cir1Q9DA19 450 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Szt2A2A9C3 3431 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tmem200bD3Z0P8 284 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ccdc74aE9Q9U8 364 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Vmn1r122K7N726 305 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tgfbr3O88393 850 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 HexaP29416 528 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 A4gntQ14BT6 341 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Scarb1Q61009 509 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 RfesdQ8K2P6 157 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr474Q8VFC9 310 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr583Q8VG25 319 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Zfp959Q91VM8 539 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Slc35a4Q9D321 324 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Med8Q9D7W5 268 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 TfecQ9WTW4 317 aa15.24■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Igkv9-124A0A0G2JDR3 117 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr789A0A1L1SV77 312 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Vmn2r101E9PZS9 857 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gm6619F6URP1 175 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 DbiP31786 87 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Rnase12Q5GAM8 145 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Pla2g7Q60963 440 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1281Q7TQY6 305 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lrg1Q91XL1 342 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 2610524H06RikQ9CZU9 139 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gm3685J3QPP2 205 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 B3galt2O54905 422 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lhx1P63006 406 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Stx4P70452 298 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1166Q7TR27 316 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Csnk1g2Q8BVP5 415 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 P2ry10bQ8BY68 352 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 LaynQ8C351 381 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Clrn1Q8K445 232 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tram1l1Q8QZR0 363 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1487Q8VFQ6 315 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 PthQ9Z0L6 115 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ndufaf6A2AIL4 333 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 4930451I11RikE9Q9R3 111 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Rad51dO55230 329 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ces2fQ08ED5 561 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Vmn1r11Q3SXA2 299 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Scrn3Q3TMH2 418 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Kcnc3Q63959 769 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Guk1Q64520 198 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gpatch2Q7TQC7 527 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1286Q7TQY2 305 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lsm11Q8BUV6 361 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 C1sbQ8CFG8 688 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Grhl2Q8K5C0 625 aa15.23■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1084A0A1L1STZ9 313 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr1158A2BHP7 313 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr115B2RTB9 312 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Olfr547E9PXN3 311 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Dbil5O09035 87 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lgals7O54974 136 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Tcte3P11985 191 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Epha1Q60750 977 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Lcn4Q62472 185 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ap1s3Q7TN05 154 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cldn34b3Q80ZS5 209 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 1810024B03RikQ8BWE1 200 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Mrm1Q99J25 320 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 1700034E13RikQ9D2T6 108 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Cdh23Q99PF4 3354 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Usp36B1AQJ2 1098 aaKnown RBP15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Gm7714E9Q079 131 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ddx6P54823 483 aaKnown RBP15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Fgf17P63075 216 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 KcnrgQ2TUM3 264 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Fam117aQ7TNF9 451 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Mblac2Q8BL86 279 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Q8BPC6 396 aa15.22■□□□□ 0.03
Ctcf-201ENSMUST00000005841 Ccdc187Q8C5V8 958 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms