RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gpr137bQ8BNQ3 385 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Frmd6Q8C0V9 622 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 FntbQ8K2I1 437 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Tmed4Q8R1V4 227 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1512Q8VF72 313 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr95Q8VFE2 312 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr582Q8VGV9 319 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc39a8Q91W10 462 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 C1ql3Q9ESN4 255 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 SpdefQ9WTP3 325 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Prob1A0A087WR45 1010 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Ighv16-1A0A0A6YW39 117 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1130A0A1L1SQT2 314 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Ndufaf6A2AIL4 333 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1129A2AV41 314 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1410E9PYK6 323 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm5407E9Q7Q1 248 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Gpr27O54897 379 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Wnt1P04426 370 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Tpi1P17751 299 aaKnown RBP14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 P20040 264 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Agtr1bP29755 359 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Defa14P50712 85 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Rps4xP62702 263 aaKnown RBP14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Plpp1Q61469 283 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Kcnc3Q63959 769 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Tmem158Q6F5E0 286 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Med16Q6PGF3 828 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc35f2Q7TML3 375 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Cpeb3Q7TN99 716 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1321Q7TQW4 319 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 LssQ8BLN5 733 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 LaynQ8C351 381 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Scmh1Q8K214 706 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 FRRS1Q8K385 592 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Cacnb4Q8R0S4 519 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr510Q8VEW6 314 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 CrtapQ9CYD3 400 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Tex37Q9DAG4 180 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Alg2Q9DBE8 415 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Bin3Q9JI08 253 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Actr10Q9QZB7 417 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Skp1Q9WTX5 163 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Cav2Q9WVC3 162 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Abhd16aQ9Z1Q2 558 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 ItpkbB2RXC2 942 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 P01637 128 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Ccl9P51670 122 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Atf4Q06507 349 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Commd2Q8BXC6 199 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Fam25cQ8CF02 89 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Lrrtm1Q8K377 522 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Ubac2Q8R1K1 345 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr1495Q8VEZ4 319 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr970Q8VFN3 311 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr826Q8VFU6 313 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Olfr825Q8VFU7 320 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Mrps24Q9CQV5 167 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 4933402D24RikQ9D4D3 167 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Cir1Q9DA19 450 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Bap18Q9DCT6 171 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Kcnmb4Q9JIN6 210 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Gab1Q9QYY0 695 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm17087V9GXQ2 156 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Trbv23A0A0A6YWQ1 115 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Ighg2cF6TQW2 404 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Speer4eK7N6S8 255 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 P01864 335 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Foxa3P35584 353 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 4933415F23RikQ14BX6 153 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Nufip2Q5F2E7 692 aaKnown RBP14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 MybphlQ5FW53 355 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Timmdc1Q8BUY5 285 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Ube3dQ8BX13 368 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Wdr13Q91V09 485 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Egln2Q91YE2 419 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Emc3Q99KI3 261 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Commd4Q9CQ02 199 aa14.83□□□□□ -0.04
Shh-201ENSMUST00000002708 Dock7Q8R1A4 2130 aaKnown RBP14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Atxn7l3A2AWT3 347 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Esp15A8R0U8 85 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Mrap2D3Z1Q2 207 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn1r91E9PZR7 307 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Nr1h5E9Q5A6 505 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn2r41E9Q5C7 852 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn2r48E9Q5D8 855 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn2r40F6W043 852 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Prps1l3G3UXL2 318 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Vmn2r36K7N741 852 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Gm8281L7N235 204 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 P01661 131 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 P01662 111 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 P01663 111 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 G6pd2P97324 513 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Epha4Q03137 986 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Pgap1Q3UUQ7 922 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Rcor3Q6PGA0 451 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Cpeb4Q7TN98 729 aaKnown RBP14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Lrfn5Q8BXA0 719 aa14.82□□□□□ -0.04
Shh-201ENSMUST00000002708 Rab7bQ8VEA8 199 aa14.82□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms