RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PXT1Q8NFP0 134 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 OR10K1Q8NGX5 313 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 BARX1Q9HBU1 254 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-233ENST00000642021 OR52A1Q9UKL2 312 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 MMACHCQ9Y4U1 282 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 P2RY10O00398 339 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 KCNAB3O43448 404 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 CD34P28906 385 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ARRB1P49407 418 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 LINC00518Q8N0U6 118 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 PAQR4Q8N4S7 273 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ST7LQ8TDW4 575 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 WWTR1Q9GZV5 400 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 CNTD2Q9H8S5 307 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 RASL12Q9NYN1 266 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 NOP16Q9Y3C1 178 aaKnown RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 TMEM269A0A1B0GVZ9 245 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 A0A1W2PQD3 144 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 MS4A18H0YCH9 400 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 RAB27BO00194 218 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ADAM10O14672 748 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 LUMP51884 338 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ELAVL1Q15717 326 aaKnown RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 MS4A18Q3C1V0 323 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 HLA-DQA1Q5Y7H0 255 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 SLC26A10Q8NG04 563 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 FAM46BQ96A09 425 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ZBTB8AQ96BR9 441 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ARL5BQ96KC2 179 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 MESP1Q9BRJ9 268 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 CST11Q9H112 138 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 DUSP15Q9H1R2 295 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 SLC25A32Q9H2D1 315 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 GDF2Q9UK05 429 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-233ENST00000642021 TNFSF18Q9UNG2 199 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 ASXL3Q9C0F0 2248 aa12.36□□□□□ -0.43
PHGDH-233ENST00000642021 TLCD2A6NGC4 264 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 FTCDNL1E5RQL4 147 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 EIF1AYO14602 144 aaKnown RBP12.35□□□□□ -0.43
PHGDH-233ENST00000642021 NDUFA2O43678 99 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 FADS1O60427 444 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ATP1B3P54709 279 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 CXADRP78310 365 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 CDNFQ49AH0 187 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 C11orf87Q6NUJ2 197 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 RHOUQ7L0Q8 258 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 KCNRGQ8N5I3 272 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 PPP1R1CQ8WVI7 109 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 CYYR1Q96J86 154 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 MYOZ1Q9NP98 299 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-233ENST00000642021 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 RNF222A6NCQ9 220 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 TOR1AO14656 332 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 AVPR2P30518 371 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 CAPZA1P52907 286 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 SLC26A5P58743 744 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 UNC119Q13432 240 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF260Q3ZCT1 412 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ELP2Q6IA86 826 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 RNF144BQ7Z419 303 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 BOLLQ8N9W6 283 aaKnown RBP12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ASB13Q8WXK3 278 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 AQP3Q92482 292 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 MARC2Q969Z3 335 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 FGGYQ96C11 551 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 PDCD10Q9BUL8 212 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 TPSD1Q9BZJ3 242 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 PTGES2Q9H7Z7 377 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 CENPMQ9NSP4 180 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 MED29Q9NX70 200 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 IGLV3-19P01714 112 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ZBTB25P24278 435 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ELOCQ15369 112 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 SHISA6Q6ZSJ9 500 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 GRINAQ7Z429 371 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF584Q8IVC4 421 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 OR52N4Q8NGI2 321 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 NUDCD2Q8WVJ2 157 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 EDAQ92838 391 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 VRK1Q99986 396 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-233ENST00000642021 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 GPN3Q9UHW5 284 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-233ENST00000642021 PLEKHA6Q9Y2H5 1048 aa12.35□□□□□ -0.43
PHGDH-233ENST00000642021 A0A0D9SG52 128 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 MEGF11A6BM72 1044 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 TO15178 435 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 AHSA1O95433 338 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 IGHMP01871 453 aa12.34□□□□□ -0.43
PHGDH-233ENST00000642021 ISG15P05161 165 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms