RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 HIST1H3AP68431 136 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 COX10Q12887 443 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 HIST2H3PS2Q5TEC6 136 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 ACSM5Q6NUN0 579 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 HIST2H3AQ71DI3 136 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 PEG10Q86TG7 708 aaKnown RBP21.38■■□□□ 1.01
VEGFA-232ENST00000640653 ZBTB46Q86UZ6 589 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 DHFR2Q86XF0 187 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 SDR9C7Q8NEX9 313 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 SLC26A10Q8NG04 563 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 HAVCR1Q96D42 359 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 MAGIXQ9H6Y5 334 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 CDH10Q9Y6N8 788 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 ATRQ13535 2644 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 TRAV20A0A0B4J274 112 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 DBHP09172 617 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 RAC2P15153 192 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 LCN8Q6JVE9 175 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 OR9Q2Q8NGE9 314 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 OR52E2Q8NGJ4 325 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 POP5Q969H6 163 aaKnown RBP21.37■■□□□ 1.01
VEGFA-232ENST00000640653 APOBEC3DQ96AK3 386 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-232ENST00000640653 CDADC1Q9BWV3 514 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 EGLN3Q9H6Z9 239 aa21.37■■□□□ 1.01
VEGFA-232ENST00000640653 TCRBV5S2A0A599 114 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 OR6C68A6NDL8 312 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 CCNB2O95067 398 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 IGHV2-5P01817 119 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 HLA-DQA2P01906 255 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 TNFRSF1AP19438 455 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.36■■□□□ 1.01
VEGFA-232ENST00000640653 TRIM25Q14258 630 aaKnown RBP21.36■■□□□ 1.01
VEGFA-232ENST00000640653 CLEC12AQ5QGZ9 265 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 SLC35F1Q5T1Q4 408 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 CORO6Q6QEF8 472 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 OR2Z1Q8NG97 314 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 GAL3ST1Q99999 423 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 BTBD10Q9BSF8 475 aa21.36■■□□□ 1.01
VEGFA-232ENST00000640653 SURF4O15260 269 aa21.35■■□□□ 1.01
VEGFA-232ENST00000640653 FAM98BQ52LJ0 330 aaKnown RBP21.35■■□□□ 1.01
VEGFA-232ENST00000640653 OR4C15Q8NGM1 316 aa21.35■■□□□ 1.01
VEGFA-232ENST00000640653 OR2AJ1Q8NGZ0 328 aa21.35■■□□□ 1.01
VEGFA-232ENST00000640653 FN3KQ9H479 309 aa21.35■■□□□ 1.01
VEGFA-232ENST00000640653 PTTG3PQ9NZH4 202 aa21.35■■□□□ 1.01
VEGFA-232ENST00000640653 PRPF19Q9UMS4 504 aaKnown RBP21.35■■□□□ 1.01
VEGFA-232ENST00000640653 ISPDA4D126 451 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 DEAF1O75398 565 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-232ENST00000640653 ECH1Q13011 328 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 LIPNQ5VXI9 398 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 SLC18B1Q6NT16 456 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 FBXW12Q6X9E4 464 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 Q6ZR03 302 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 RASSF6Q6ZTQ3 369 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 LINC00346Q8IVM7 164 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 RFLNBQ8N5W9 214 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 PITX2Q99697 317 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 IL20Q9NYY1 176 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 IL19Q9UHD0 177 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 KCNG2Q9UJ96 466 aa21.34■■□□□ 1.01
VEGFA-232ENST00000640653 BHLHE40O14503 412 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 DYNC1I1O14576 645 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 PNPP00491 289 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 GASTP01350 101 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 SPRNQ5BIV9 151 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 ZNF770Q6IQ21 691 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-232ENST00000640653 SHQ1Q6PI26 577 aaKnown RBP21.33■■□□□ 1.01
VEGFA-232ENST00000640653 CFAP77Q6ZQR2 320 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 TEX29Q8N6K0 151 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 AQP11Q8NBQ7 271 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 ATF6BQ99941 703 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 REEP1Q9H902 201 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 TBC1D23Q9NUY8 699 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 CYB5R1Q9UHQ9 305 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 NPTNQ9Y639 398 aa21.33■■□□□ 1.01
VEGFA-232ENST00000640653 MXRA5Q9NR99 2828 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 ZNF823P16415 610 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 ERFP50548 548 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 MS4A2Q01362 244 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 DBPQ10586 325 aaPredicted RBP21.32■■□□□ 1
VEGFA-232ENST00000640653 SCGB2A2Q13296 93 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 HLXQ14774 488 aaPredicted RBP21.32■■□□□ 1
VEGFA-232ENST00000640653 KRTAP24-1Q3LI83 254 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 OR2T5Q6IEZ7 315 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 SLC27A4Q6P1M0 643 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 FAHD2BQ6P2I3 314 aaPredicted RBP21.32■■□□□ 1
VEGFA-232ENST00000640653 OR5AS1Q8N127 324 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 PROKR2Q8NFJ6 384 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 OR2T4Q8NH00 348 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 OR2T29Q8NH02 315 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 FAHD2AQ96GK7 314 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 LRGUKQ96M69 825 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 TMEM106BQ9NUM4 274 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 METRNQ9UJH8 293 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 SAMHD1Q9Y3Z3 626 aaKnown RBP21.32■■□□□ 1
VEGFA-232ENST00000640653 COL6A5A8TX70 2615 aa21.32■■□□□ 1
VEGFA-232ENST00000640653 TCF21O43680 179 aa21.31■■□□□ 1
VEGFA-232ENST00000640653 PLPP2O43688 288 aa21.31■■□□□ 1
VEGFA-232ENST00000640653 T-ENOLP0DO92 83 aa21.31■■□□□ 1
VEGFA-232ENST00000640653 GGT2P36268 569 aa21.31■■□□□ 1
VEGFA-232ENST00000640653 MICAQ29983 383 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms