RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 IGKV3-11P04433 115 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 CD38P28907 300 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 CATSPERDQ86XM0 798 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 TMEM185AQ8NFB2 350 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 PXT1Q8NFP0 134 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 ZDHHC12Q96GR4 267 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 UTP23Q9BRU9 249 aaKnown RBP13.06□□□□□ -0.32
SCARB2-221ENST00000640341 VN1R1Q9GZP7 353 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 VSIG4Q9Y279 399 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 PHF3Q92576 2039 aaKnown RBP13.06□□□□□ -0.32
SCARB2-221ENST00000640341 METTL21EPA6NDL7 271 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 RFPL4AA6NLU0 287 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 RFPL4AL1F8VTS6 287 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 SYT7O43581 403 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 ITGB2P05107 769 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 IFI6P09912 130 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 OR5D18Q8NGL1 313 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 TMEM41AQ96HV5 264 aa13.06□□□□□ -0.32
SCARB2-221ENST00000640341 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-221ENST00000640341 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 OR2AT4A6NND4 320 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 ALG1L2C9J202 215 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 CRABP1P29762 137 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 CDAP32320 146 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 GABRA4P48169 554 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-221ENST00000640341 AWAT2Q6E213 333 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 FOXRED2Q8IWF2 684 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 OR13C8Q8NGS7 320 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 ZNF519Q8TB69 540 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 SOX7Q9BT81 388 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 BANF2Q9H503 90 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 KRBOX1C9JBD0 128 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 FASLGP48023 281 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 BIDP55957 195 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 SLC26A5P58743 744 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 TEX30Q5JUR7 227 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 IQCF2Q8IXL9 164 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 FAM71F1Q96KD3 344 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-221ENST00000640341 R4GMQ9 66 aa13.05□□□□□ -0.32
SCARB2-221ENST00000640341 STK17BO94768 372 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 GUSBP08236 651 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 BAMBIQ13145 260 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 INPP5JQ15735 1006 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 KLHL24Q6TFL4 600 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ADAD2Q8NCV1 583 aaKnown RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 CCNL2Q96S94 520 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 NICN1Q9BSH3 213 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 BLACEA4D250 179 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 DISC1C4P0D8 188 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ZNF354AO60765 605 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ABOP16442 354 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 MPGP29372 298 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 OR2I1PQ8NGU4 316 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 OR51E1Q8TCB6 317 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ADAT3Q96EY9 351 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 SLC25A21Q9BQT8 299 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ASF1BQ9NVP2 202 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 KLRF1Q9NZS2 232 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 GPN3Q9UHW5 284 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 MPIG6BO95866 241 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 MT-ATP6P00846 226 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 CD96P40200 585 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 MECP2P51608 486 aaKnown RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 ANGPTL5Q86XS5 388 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 TMEM229BQ8NBD8 167 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 SLC26A10Q8NG04 563 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 LRRC46Q96FV0 321 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 GPER1Q99527 375 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 GDF2Q9UK05 429 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-221ENST00000640341 CA14Q9ULX7 337 aa13.04□□□□□ -0.32
SCARB2-221ENST00000640341 A0A1W2PP11 408 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 TSPAN2O60636 221 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 GIMD1P0DJR0 217 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 IGFBP4P22692 258 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 FOXK1P85037 733 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 MC2RQ01718 297 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 SHARPINQ9H0F6 387 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 C8orf33Q9H7E9 229 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-221ENST00000640341 MBD2Q9UBB5 411 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 H3BUI4 141 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 DXOO77932 396 aaKnown RBP13.03□□□□□ -0.32
SCARB2-221ENST00000640341 RPA2P15927 270 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 CCR5P51681 352 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 SLC9A3R2Q15599 337 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-221ENST00000640341 INO80EQ8NBZ0 244 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-221ENST00000640341 OR1N1Q8NGS0 311 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 MARCH1Q8TCQ1 289 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 ADAT1Q9BUB4 502 aaKnown RBP13.03□□□□□ -0.32
SCARB2-221ENST00000640341 OR2S2Q9NQN1 319 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 A0A1W2PNR3 127 aa13.03□□□□□ -0.32
SCARB2-221ENST00000640341 OR6C65A6NJZ3 312 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms