RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 USP28Q96RU2 1077 aa2.7□□□□□ -1.98
CCDC7-213ENST00000639290 FEVQ99581 238 aa2.7□□□□□ -1.98
CCDC7-213ENST00000639290 SPAG8Q99932 426 aaPredicted RBP2.7□□□□□ -1.98
CCDC7-213ENST00000639290 FAM110AQ9BQ89 295 aa2.7□□□□□ -1.98
CCDC7-213ENST00000639290 CLN8Q9UBY8 286 aa2.7□□□□□ -1.98
CCDC7-213ENST00000639290 FOXA2Q9Y261 457 aaPredicted RBP2.7□□□□□ -1.98
CCDC7-213ENST00000639290 DHRS7Q9Y394 339 aa2.7□□□□□ -1.98
CCDC7-213ENST00000639290 TCRBV7S3A2A0A539 114 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MACROD2A1Z1Q3 448 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LRIT2A6NDA9 550 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZNF716A6NP11 495 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 B4DXG7 233 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 E9PI62 339 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 H3BQV1 296 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CHST1O43916 411 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MFN2O95140 757 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 NTN1O95631 604 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 IGHV3-13P01766 116 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 NGFRP08138 427 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZNF735P0CB33 412 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 FKBP2P26885 142 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 IL12BP29460 328 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LCN1P31025 176 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 NPBWR1P48145 328 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CNN1P51911 297 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 UBE2E1P51965 193 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 XGP55808 180 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 EGR4Q05215 589 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SELENBP1Q13228 472 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PDK2Q15119 407 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 TPD52L1Q16890 204 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PNLIPRP3Q17RR3 467 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 TEDDM1Q5T9Z0 273 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LGSNQ5TDP6 509 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 WDR25Q64LD2 544 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PAQR6Q6TCH4 344 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MON1BQ7L1V2 547 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZDHHC21Q8IVQ6 265 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CENPLQ8N0S6 344 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 OSR2Q8N2R0 312 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 BHLHE23Q8NDY6 225 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 FAM71CQ8NEG0 241 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 OR13C4Q8NGS5 318 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 OR4Q3Q8NH05 313 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 HUS1BQ8NHY5 278 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZNF519Q8TB69 540 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 XAGE5Q8WWM1 108 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 OIT3Q8WWZ8 545 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LRRC39Q96DD0 335 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZNF300Q96RE9 604 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 NEU1Q99519 415 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CPNE1Q99829 537 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 AICDAQ9GZX7 198 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 KCNE5Q9UJ90 142 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MRTO4Q9UKD2 239 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LRP12Q9Y561 859 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SERTM2A0A1B0GWG4 89 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ANKDD1BA6NHY2 528 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 C12orf77C9JDV5 145 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 K7EQM0 130 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 AP4M1O00189 453 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 BUD23O43709 281 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CNIH1O95406 144 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 IFNA4P05014 189 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 IGF1P05019 195 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CLUP10909 449 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SPNP16150 400 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 CPN2P22792 545 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SERPINB1P30740 379 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 TPTEP56180 551 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SLC18A2Q05940 514 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 NAE1Q13564 534 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MAD2L1BPQ15013 274 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 TMEM35AQ53FP2 167 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LBHQ53QV2 105 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 DUPD1Q68J44 220 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 DCDC5Q6ZRR9 648 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 BZW1Q7L1Q6 419 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MAVSQ7Z434 540 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 NANOGNBQ7Z5D8 188 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZNF695Q8IW36 515 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PRR22Q8IZ63 422 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SPATA22Q8NHS9 363 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SYNPRQ8TBG9 265 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SUN5Q8TC36 379 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SKA2Q8WVK7 121 aaPredicted RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ESAMQ96AP7 390 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PPWD1Q96BP3 646 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 FBXL8Q96CD0 374 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZNF607Q96SK3 696 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ATG101Q9BSB4 218 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 LINC00470Q9BZP3 86 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 SLC19A3Q9BZV2 496 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PKIBQ9C010 78 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 C1orf198Q9H425 327 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 KLHL31Q9H511 634 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 ZCCHC3Q9NUD5 404 aaKnown RBP2.69□□□□□ -1.98
CCDC7-213ENST00000639290 PARVAQ9NVD7 372 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 VNN3Q9NY84 501 aa2.69□□□□□ -1.98
CCDC7-213ENST00000639290 MED11Q9P086 117 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms