RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 A8MVM7 634 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 ABOP16442 354 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 CFHR1Q03591 330 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 TLE3Q04726 772 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 TMPPEQ6ZT21 453 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 CDH26Q8IXH8 852 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 C15orf40Q8WUR7 153 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 LIPHQ8WWY8 451 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 VRK1Q99986 396 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 ZP3P21754 424 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 POLR2HP52434 150 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 BIDP55957 195 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 PRSS12P56730 875 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 MFAP5Q13361 173 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 ELAVL1Q15717 326 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 RNASE10Q5GAN6 216 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 FOXRED2Q8IWF2 684 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 ST8SIA2Q92186 375 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 EVA1AQ9H8M9 152 aa12.54□□□□□ -0.4
CACNA1A-228ENST00000636610 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 TSPAN9O75954 239 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 KLK2P20151 261 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 IL13RA1P78552 427 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 TEX30Q5JUR7 227 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 ADGRE4PQ86SQ3 457 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 GKN2Q86XP6 184 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 ARMC10Q8N2F6 343 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 BVESQ8NE79 360 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 ZNF275Q9NSD4 429 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 TSPAN2O60636 221 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 ITGB2P05107 769 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 SFTPDP35247 375 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 CD96P40200 585 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 FASLGP48023 281 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 SLC6A8P48029 635 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 NAXEQ8NCW5 288 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 DAZLQ92904 295 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 UTP23Q9BRU9 249 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-228ENST00000636610 F5H0A9 414 aaPredicted RBP12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 MS4A18H0YCH9 400 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 DLSTP36957 453 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 DHODHQ02127 395 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 MS4A18Q3C1V0 323 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 TMEM88Q6PEY1 159 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 TMEM185AQ8NFB2 350 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 OR5M9Q8NGP3 310 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 ZDHHC12Q96GR4 267 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 G6PC2Q9NQR9 355 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 LHX6Q9UPM6 363 aa12.52□□□□□ -0.4
CACNA1A-228ENST00000636610 LRP4O75096 1905 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 OR2AT4A6NND4 320 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 SYT7O43581 403 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 B3GALNT1O75752 331 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 ERCC1P07992 297 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 NAT1P18440 290 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 MPGP29372 298 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC26A5P58743 744 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 AWAT2Q6E213 333 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 BHLHE23Q8NDY6 225 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 CCDC107Q8WV48 283 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 ASB17Q8WXJ9 295 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM41AQ96HV5 264 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 FGF21Q9NSA1 209 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 GDF2Q9UK05 429 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 R4GMQ9 66 aa12.52□□□□□ -0.41
CACNA1A-228ENST00000636610 FAM74A7A6NL05 159 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 RFPL4AA6NLU0 287 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 D6RAR5 112 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 RFPL4AL1F8VTS6 287 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 PHYHO14832 338 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 HTR3BO95264 441 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 EPHA4P54764 986 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 UNC119Q13432 240 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 FAM74A3Q4VXF1 159 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 FAM166AQ6J272 317 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 GALNTL5Q7Z4T8 443 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 MARCH1Q8TCQ1 289 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF775Q96BV0 537 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 IFT46Q9NQC8 304 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 KLRF1Q9NZS2 232 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 RABL2AQ9UBK7 228 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 RABL2BQ9UNT1 228 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 IGHV1OR15-9A0A0B4J2B8 117 aa12.51□□□□□ -0.41
CACNA1A-228ENST00000636610 KANTRA0A1W2PQU2 76 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms